Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TNFSF12-TNFSF13A0A0A6YY99 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
TNFSF12-TNFSF13A0A0A6YY99 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.27■■□□□ 1.64
TNFSF12-TNFSF13A0A0A6YY99 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.25■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.24■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.21■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.63
TNFSF12-TNFSF13A0A0A6YY99 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.17■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.17■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.16■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 RARRES2P7-201ENST00000567349 469 ntBASIC25.15■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFSF12-TNFSF13A0A0A6YY99 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFSF12-TNFSF13A0A0A6YY99 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.12■■□□□ 1.61
TNFSF12-TNFSF13A0A0A6YY99 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.12■■□□□ 1.61
TNFSF12-TNFSF13A0A0A6YY99 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.11■■□□□ 1.61
TNFSF12-TNFSF13A0A0A6YY99 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.1■■□□□ 1.61
TNFSF12-TNFSF13A0A0A6YY99 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFSF12-TNFSF13A0A0A6YY99 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.06■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.05■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.05■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.02■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.02■■□□□ 1.6
TNFSF12-TNFSF13A0A0A6YY99 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
TNFSF12-TNFSF13A0A0A6YY99 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TNFSF12-TNFSF13A0A0A6YY99 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
TNFSF12-TNFSF13A0A0A6YY99 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
TNFSF12-TNFSF13A0A0A6YY99 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.98■■□□□ 1.59
TNFSF12-TNFSF13A0A0A6YY99 SETD8P1-201ENST00000623146 1180 ntBASIC24.97■■□□□ 1.59
TNFSF12-TNFSF13A0A0A6YY99 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.95■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.95■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.95■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.94■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.94■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 AC097358.2-201ENST00000607541 1159 ntBASIC24.92■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.92■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 AC136428.2-201ENST00000563187 214 ntBASIC24.91■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 AC120057.4-201ENST00000624722 1615 ntBASIC24.9■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TNFSF12-TNFSF13A0A0A6YY99 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.87■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.87■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.83■■□□□ 1.57
TNFSF12-TNFSF13A0A0A6YY99 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.82■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 AL133380.1-201ENST00000506013 324 ntBASIC24.79■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.78■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.77■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TNFSF12-TNFSF13A0A0A6YY99 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.76■■□□□ 1.55
TNFSF12-TNFSF13A0A0A6YY99 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.76■■□□□ 1.55
TNFSF12-TNFSF13A0A0A6YY99 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms