Protein–RNA interactions for Protein: A0A087X0B3

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A087X0B3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.4■■■□□ 2.62
A0A087X0B3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.39■■■□□ 2.62
A0A087X0B3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
A0A087X0B3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.38■■■□□ 2.61
A0A087X0B3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
A0A087X0B3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.37■■■□□ 2.61
A0A087X0B3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
A0A087X0B3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
A0A087X0B3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.37■■■□□ 2.61
A0A087X0B3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
A0A087X0B3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
A0A087X0B3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
A0A087X0B3 AL031258.1-201ENST00000623562 325 ntBASIC31.36■■■□□ 2.61
A0A087X0B3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
A0A087X0B3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.35■■■□□ 2.61
A0A087X0B3 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.35■■■□□ 2.61
A0A087X0B3 AP002365.1-201ENST00000603448 772 ntBASIC31.34■■■□□ 2.61
A0A087X0B3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
A0A087X0B3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.33■■■□□ 2.61
A0A087X0B3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
A0A087X0B3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.32■■■□□ 2.6
A0A087X0B3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
A0A087X0B3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
A0A087X0B3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
A0A087X0B3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.24■■■□□ 2.59
A0A087X0B3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
A0A087X0B3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
A0A087X0B3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.22■■■□□ 2.59
A0A087X0B3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.22■■■□□ 2.59
A0A087X0B3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.22■■■□□ 2.59
A0A087X0B3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
A0A087X0B3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
A0A087X0B3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
A0A087X0B3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
A0A087X0B3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
A0A087X0B3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
A0A087X0B3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.15■■■□□ 2.58
A0A087X0B3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.15■■■□□ 2.58
A0A087X0B3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.15■■■□□ 2.58
A0A087X0B3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.14■■■□□ 2.57
A0A087X0B3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.13■■■□□ 2.57
A0A087X0B3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
A0A087X0B3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.13■■■□□ 2.57
A0A087X0B3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
A0A087X0B3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
A0A087X0B3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
A0A087X0B3 AC120057.4-201ENST00000624722 1615 ntBASIC31.1■■■□□ 2.57
A0A087X0B3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
A0A087X0B3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
A0A087X0B3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
A0A087X0B3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.07■■■□□ 2.56
A0A087X0B3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
A0A087X0B3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
A0A087X0B3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.05■■■□□ 2.56
A0A087X0B3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
A0A087X0B3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
A0A087X0B3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
A0A087X0B3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
A0A087X0B3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
A0A087X0B3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
A0A087X0B3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
A0A087X0B3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31■■■□□ 2.55
A0A087X0B3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.99■■■□□ 2.55
A0A087X0B3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
A0A087X0B3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.99■■■□□ 2.55
A0A087X0B3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
A0A087X0B3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.96■■■□□ 2.55
A0A087X0B3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
A0A087X0B3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
A0A087X0B3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
A0A087X0B3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
A0A087X0B3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
A0A087X0B3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
A0A087X0B3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.89■■■□□ 2.54
A0A087X0B3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.89■■■□□ 2.53
A0A087X0B3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.87■■■□□ 2.53
A0A087X0B3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.87■■■□□ 2.53
A0A087X0B3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
A0A087X0B3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
A0A087X0B3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.86■■■□□ 2.53
A0A087X0B3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.86■■■□□ 2.53
A0A087X0B3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
A0A087X0B3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
A0A087X0B3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
A0A087X0B3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
A0A087X0B3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
A0A087X0B3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
A0A087X0B3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.8■■■□□ 2.52
A0A087X0B3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
A0A087X0B3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
A0A087X0B3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
A0A087X0B3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
A0A087X0B3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
A0A087X0B3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
A0A087X0B3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
A0A087X0B3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
A0A087X0B3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
A0A087X0B3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
A0A087X0B3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
A0A087X0B3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms