Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.27□□□□□ -0.44
TMEM54Q969K7 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
TMEM54Q969K7 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.27□□□□□ -0.44
TMEM54Q969K7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TMEM54Q969K7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.27□□□□□ -0.44
TMEM54Q969K7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TMEM54Q969K7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TMEM54Q969K7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TMEM54Q969K7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.27□□□□□ -0.44
TMEM54Q969K7 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.27□□□□□ -0.44
TMEM54Q969K7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TMEM54Q969K7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 AC106827.1-201ENST00000366454 431 ntBASIC12.27□□□□□ -0.45
TMEM54Q969K7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 AL592076.1-201ENST00000424448 303 ntBASIC12.27□□□□□ -0.45
TMEM54Q969K7 AC092573.1-201ENST00000433054 884 ntBASIC12.27□□□□□ -0.45
TMEM54Q969K7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 AC018638.5-201ENST00000450885 754 ntBASIC12.27□□□□□ -0.45
TMEM54Q969K7 IGHJ2P-201ENST00000454480 60 ntBASIC12.27□□□□□ -0.45
TMEM54Q969K7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 CHMP4BP1-201ENST00000556017 588 ntBASIC12.27□□□□□ -0.45
TMEM54Q969K7 FGFR3P5-201ENST00000564496 886 ntBASIC12.27□□□□□ -0.45
TMEM54Q969K7 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TMEM54Q969K7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TMEM54Q969K7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 CICP17-201ENST00000418553 2377 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 AC005014.1-201ENST00000432006 2976 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TMEM54Q969K7 RPL3P2-204ENST00000413027 1203 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 SLC25A24P2-201ENST00000415059 510 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 AL512306.1-201ENST00000432698 848 ntBASIC12.26□□□□□ -0.45
TMEM54Q969K7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.26□□□□□ -0.45
TMEM54Q969K7 GRPEL2P1-201ENST00000453145 339 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms