RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
SYNRG-217ENST00000612223 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
SYNRG-217ENST00000612223 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
SYNRG-217ENST00000612223 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
SYNRG-217ENST00000612223 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
SYNRG-217ENST00000612223 APLP2Q06481 763 aa22.9■■□□□ 1.26
SYNRG-217ENST00000612223 TTBK1Q5TCY1 1321 aaPredicted RBP22.61■■□□□ 1.21
SYNRG-217ENST00000612223 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
SYNRG-217ENST00000612223 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
SYNRG-217ENST00000612223 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
SYNRG-217ENST00000612223 ATP1B4Q9UN42 357 aaPredicted RBP22.47■■□□□ 1.19
SYNRG-217ENST00000612223 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
SYNRG-217ENST00000612223 MYT1LQ9UL68 1186 aa21.95■■□□□ 1.1
SYNRG-217ENST00000612223 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
SYNRG-217ENST00000612223 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
SYNRG-217ENST00000612223 ERICH6Q7L0X2 663 aa21.78■■□□□ 1.08
SYNRG-217ENST00000612223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
SYNRG-217ENST00000612223 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
SYNRG-217ENST00000612223 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
SYNRG-217ENST00000612223 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
SYNRG-217ENST00000612223 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
SYNRG-217ENST00000612223 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
SYNRG-217ENST00000612223 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
SYNRG-217ENST00000612223 ITGAEP38570 1179 aa21.35■■□□□ 1.01
SYNRG-217ENST00000612223 NEFLP07196 543 aa21.34■■□□□ 1.01
SYNRG-217ENST00000612223 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
SYNRG-217ENST00000612223 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
SYNRG-217ENST00000612223 CNGB1Q14028 1251 aaPredicted RBP21.26■□□□□ 0.99
SYNRG-217ENST00000612223 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
SYNRG-217ENST00000612223 DAXXQ9UER7 740 aaPredicted RBP20.99■□□□□ 0.95
SYNRG-217ENST00000612223 FBLN2P98095 1184 aa20.83■□□□□ 0.93
SYNRG-217ENST00000612223 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
SYNRG-217ENST00000612223 BCANQ96GW7 911 aa20.74■□□□□ 0.91
SYNRG-217ENST00000612223 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
SYNRG-217ENST00000612223 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
SYNRG-217ENST00000612223 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
SYNRG-217ENST00000612223 MYT1Q01538 1121 aa20.69■□□□□ 0.9
SYNRG-217ENST00000612223 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
SYNRG-217ENST00000612223 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
SYNRG-217ENST00000612223 TRIM26Q12899 539 aaPredicted RBP20.57■□□□□ 0.88
SYNRG-217ENST00000612223 ABCC9O60706 1549 aa20.53■□□□□ 0.88
SYNRG-217ENST00000612223 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
SYNRG-217ENST00000612223 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
SYNRG-217ENST00000612223 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
SYNRG-217ENST00000612223 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
SYNRG-217ENST00000612223 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
SYNRG-217ENST00000612223 ARID3CA6NKF2 412 aa20.45■□□□□ 0.86
SYNRG-217ENST00000612223 ZBTB47Q9UFB7 747 aaPredicted RBP20.4■□□□□ 0.86
SYNRG-217ENST00000612223 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
SYNRG-217ENST00000612223 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
SYNRG-217ENST00000612223 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
SYNRG-217ENST00000612223 HRCP23327 699 aa20.25■□□□□ 0.83
SYNRG-217ENST00000612223 NEFMP07197 916 aa20.25■□□□□ 0.83
SYNRG-217ENST00000612223 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
SYNRG-217ENST00000612223 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
SYNRG-217ENST00000612223 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
SYNRG-217ENST00000612223 NPM1P06748 294 aaKnown RBP eCLIP20.12■□□□□ 0.81
SYNRG-217ENST00000612223 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
SYNRG-217ENST00000612223 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
SYNRG-217ENST00000612223 ANP32CO43423 234 aa20■□□□□ 0.79
SYNRG-217ENST00000612223 A0A0G2JS52 829 aa19.99■□□□□ 0.79
SYNRG-217ENST00000612223 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
SYNRG-217ENST00000612223 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
SYNRG-217ENST00000612223 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
SYNRG-217ENST00000612223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.763e-6■■□□□ 11.4
SYNRG-217ENST00000612223 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
SYNRG-217ENST00000612223 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
SYNRG-217ENST00000612223 C14orf37Q86TY3 774 aa19.69■□□□□ 0.74
SYNRG-217ENST00000612223 NPM2Q86SE8 214 aaKnown RBP19.63■□□□□ 0.73
SYNRG-217ENST00000612223 HAP1P54257 671 aaPredicted RBP19.61■□□□□ 0.73
SYNRG-217ENST00000612223 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
SYNRG-217ENST00000612223 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
SYNRG-217ENST00000612223 CHIC2Q9UKJ5 165 aa19.6■□□□□ 0.73
SYNRG-217ENST00000612223 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
SYNRG-217ENST00000612223 SALL2Q9Y467 1007 aaPredicted RBP19.59■□□□□ 0.73
SYNRG-217ENST00000612223 PPP1R15AO75807 674 aaPredicted RBP19.56■□□□□ 0.72
SYNRG-217ENST00000612223 HSP90AA1P07900 732 aaKnown RBP19.56■□□□□ 0.72
SYNRG-217ENST00000612223 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
SYNRG-217ENST00000612223 KDM2AQ9Y2K7 1162 aa19.53■□□□□ 0.72
SYNRG-217ENST00000612223 ARXQ96QS3 562 aa19.48■□□□□ 0.71
SYNRG-217ENST00000612223 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
SYNRG-217ENST00000612223 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
SYNRG-217ENST00000612223 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
SYNRG-217ENST00000612223 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
SYNRG-217ENST00000612223 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
SYNRG-217ENST00000612223 ANP32AP39687 249 aaKnown RBP19.41■□□□□ 0.7
SYNRG-217ENST00000612223 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
SYNRG-217ENST00000612223 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
SYNRG-217ENST00000612223 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
SYNRG-217ENST00000612223 UPF2Q9HAU5 1272 aaKnown RBP19.36■□□□□ 0.69
SYNRG-217ENST00000612223 ANP32BQ92688 251 aaKnown RBP19.36■□□□□ 0.69
SYNRG-217ENST00000612223 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
SYNRG-217ENST00000612223 CDK11BP21127 795 aaKnown RBP19.31■□□□□ 0.68
SYNRG-217ENST00000612223 TMC1Q8TDI8 760 aa19.31■□□□□ 0.68
SYNRG-217ENST00000612223 NPHP1O15259 732 aa19.29■□□□□ 0.68
SYNRG-217ENST00000612223 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
SYNRG-217ENST00000612223 TULP1O00294 542 aaPredicted RBP19.27■□□□□ 0.68
SYNRG-217ENST00000612223 MYH16Q9H6N6 1097 aa19.25■□□□□ 0.67
SYNRG-217ENST00000612223 DDX10Q13206 875 aaKnown RBP19.25■□□□□ 0.67
SYNRG-217ENST00000612223 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms