Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOA1P02647 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOA1P02647 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOA1P02647 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.52□□□□□ -0.41
APOA1P02647 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 RN7SKP230-201ENST00000365642 335 ntBASIC12.52□□□□□ -0.41
APOA1P02647 AL139400.1-201ENST00000366220 510 ntBASIC12.52□□□□□ -0.41
APOA1P02647 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
APOA1P02647 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.52□□□□□ -0.41
APOA1P02647 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.52□□□□□ -0.41
APOA1P02647 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 RPL13AP25-201ENST00000484130 612 ntBASIC12.52□□□□□ -0.41
APOA1P02647 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.52□□□□□ -0.41
APOA1P02647 AL512356.2-201ENST00000546955 174 ntBASIC12.52□□□□□ -0.41
APOA1P02647 AC036164.1-201ENST00000570544 333 ntBASIC12.52□□□□□ -0.41
APOA1P02647 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 BX088702.1-201ENST00000610784 235 ntBASIC12.52□□□□□ -0.41
APOA1P02647 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.52□□□□□ -0.41
APOA1P02647 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.52□□□□□ -0.41
APOA1P02647 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.52□□□□□ -0.41
APOA1P02647 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.52□□□□□ -0.41
APOA1P02647 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.52□□□□□ -0.41
APOA1P02647 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
APOA1P02647 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOA1P02647 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
APOA1P02647 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 AL109976.1-201ENST00000621919 5678 ntBASIC12.51□□□□□ -0.41
APOA1P02647 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 HSPA8P9-201ENST00000485881 1943 ntBASIC12.51□□□□□ -0.41
APOA1P02647 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 RNU1-114P-201ENST00000365297 166 ntBASIC12.51□□□□□ -0.41
APOA1P02647 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.51□□□□□ -0.41
APOA1P02647 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
APOA1P02647 ARSEP1-201ENST00000420443 635 ntBASIC12.51□□□□□ -0.41
APOA1P02647 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 AC114501.2-201ENST00000439631 535 ntBASIC12.51□□□□□ -0.41
APOA1P02647 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOA1P02647 VDAC1P7-201ENST00000462417 847 ntBASIC12.51□□□□□ -0.41
APOA1P02647 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 AP000344.2-201ENST00000512987 629 ntBASIC12.51□□□□□ -0.41
APOA1P02647 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOA1P02647 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.51□□□□□ -0.41
APOA1P02647 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms