RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.87
SH3KBP1-202ENST00000379698 SHROOM4Q9ULL8 1493 aa22.7■■□□□ 1.22
SH3KBP1-202ENST00000379698 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
SH3KBP1-202ENST00000379698 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
SH3KBP1-202ENST00000379698 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
SH3KBP1-202ENST00000379698 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
SH3KBP1-202ENST00000379698 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
SH3KBP1-202ENST00000379698 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
SH3KBP1-202ENST00000379698 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
SH3KBP1-202ENST00000379698 HRCP23327 699 aa21.52■■□□□ 1.04
SH3KBP1-202ENST00000379698 ABCC9O60706 1549 aa21.38■■□□□ 1.01
SH3KBP1-202ENST00000379698 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
SH3KBP1-202ENST00000379698 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
SH3KBP1-202ENST00000379698 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
SH3KBP1-202ENST00000379698 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
SH3KBP1-202ENST00000379698 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
SH3KBP1-202ENST00000379698 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
SH3KBP1-202ENST00000379698 NACADO15069 1562 aa20.94■□□□□ 0.94
SH3KBP1-202ENST00000379698 TRIM41Q8WV44 630 aa20.91■□□□□ 0.94
SH3KBP1-202ENST00000379698 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
SH3KBP1-202ENST00000379698 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
SH3KBP1-202ENST00000379698 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
SH3KBP1-202ENST00000379698 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
SH3KBP1-202ENST00000379698 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
SH3KBP1-202ENST00000379698 WIZO95785 1651 aa20.6■□□□□ 0.89
SH3KBP1-202ENST00000379698 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
SH3KBP1-202ENST00000379698 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
SH3KBP1-202ENST00000379698 EHMT2Q96KQ7 1210 aa20.36■□□□□ 0.85
SH3KBP1-202ENST00000379698 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
SH3KBP1-202ENST00000379698 SMARCA4P51532 1647 aa20.3■□□□□ 0.84
SH3KBP1-202ENST00000379698 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
SH3KBP1-202ENST00000379698 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
SH3KBP1-202ENST00000379698 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
SH3KBP1-202ENST00000379698 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
SH3KBP1-202ENST00000379698 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
SH3KBP1-202ENST00000379698 EEA1Q15075 1411 aa20.11■□□□□ 0.81
SH3KBP1-202ENST00000379698 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
SH3KBP1-202ENST00000379698 CEP162Q5TB80 1403 aa20.06■□□□□ 0.8
SH3KBP1-202ENST00000379698 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
SH3KBP1-202ENST00000379698 SOGA1O94964 1423 aa20.03■□□□□ 0.8
SH3KBP1-202ENST00000379698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
SH3KBP1-202ENST00000379698 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
SH3KBP1-202ENST00000379698 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
SH3KBP1-202ENST00000379698 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
SH3KBP1-202ENST00000379698 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
SH3KBP1-202ENST00000379698 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.78
SH3KBP1-202ENST00000379698 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
SH3KBP1-202ENST00000379698 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
SH3KBP1-202ENST00000379698 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
SH3KBP1-202ENST00000379698 PELP1Q8IZL8 1130 aaKnown RBP19.82■□□□□ 0.76
SH3KBP1-202ENST00000379698 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
SH3KBP1-202ENST00000379698 KIF21BO75037 1637 aa19.78■□□□□ 0.76
SH3KBP1-202ENST00000379698 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
SH3KBP1-202ENST00000379698 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
SH3KBP1-202ENST00000379698 DIEXFQ68CQ4 756 aaKnown RBP19.73■□□□□ 0.75
SH3KBP1-202ENST00000379698 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
SH3KBP1-202ENST00000379698 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
SH3KBP1-202ENST00000379698 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
SH3KBP1-202ENST00000379698 CLIP1P30622 1438 aa19.66■□□□□ 0.74
SH3KBP1-202ENST00000379698 VPS8Q8N3P4 1428 aa19.63■□□□□ 0.73
SH3KBP1-202ENST00000379698 CENPBP07199 599 aaPredicted RBP19.61■□□□□ 0.73
SH3KBP1-202ENST00000379698 NEUROD1Q13562 356 aa19.59■□□□□ 0.73
SH3KBP1-202ENST00000379698 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.73
SH3KBP1-202ENST00000379698 RAPGEF2Q9Y4G8 1499 aa19.55■□□□□ 0.72
SH3KBP1-202ENST00000379698 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
SH3KBP1-202ENST00000379698 APLP2Q06481 763 aa19.53■□□□□ 0.72
SH3KBP1-202ENST00000379698 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
SH3KBP1-202ENST00000379698 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
SH3KBP1-202ENST00000379698 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
SH3KBP1-202ENST00000379698 GTF3C3Q9Y5Q9 886 aa19.42■□□□□ 0.7
SH3KBP1-202ENST00000379698 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
SH3KBP1-202ENST00000379698 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
SH3KBP1-202ENST00000379698 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
SH3KBP1-202ENST00000379698 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.69
SH3KBP1-202ENST00000379698 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
SH3KBP1-202ENST00000379698 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
SH3KBP1-202ENST00000379698 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
SH3KBP1-202ENST00000379698 CUX1P39880 1505 aa19.29■□□□□ 0.68
SH3KBP1-202ENST00000379698 MIER1Q8N108 512 aa19.25■□□□□ 0.67
SH3KBP1-202ENST00000379698 CFTRP13569 1480 aa19.23■□□□□ 0.67
SH3KBP1-202ENST00000379698 DHX57Q6P158 1386 aaKnown RBP19.21■□□□□ 0.67
SH3KBP1-202ENST00000379698 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
SH3KBP1-202ENST00000379698 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
SH3KBP1-202ENST00000379698 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
SH3KBP1-202ENST00000379698 CUX2O14529 1486 aa19.14■□□□□ 0.65
SH3KBP1-202ENST00000379698 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
SH3KBP1-202ENST00000379698 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
SH3KBP1-202ENST00000379698 CCNB3Q8WWL7 1395 aa19.09■□□□□ 0.65
SH3KBP1-202ENST00000379698 MAP3K1Q13233 1512 aa19.04■□□□□ 0.64
SH3KBP1-202ENST00000379698 IGF1RP08069 1367 aa19.02■□□□□ 0.64
SH3KBP1-202ENST00000379698 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
SH3KBP1-202ENST00000379698 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
SH3KBP1-202ENST00000379698 CARMIL1Q5VZK9 1371 aa18.96■□□□□ 0.63
SH3KBP1-202ENST00000379698 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
SH3KBP1-202ENST00000379698 RAB3GAP2Q9H2M9 1393 aa18.91■□□□□ 0.62
SH3KBP1-202ENST00000379698 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
SH3KBP1-202ENST00000379698 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
SH3KBP1-202ENST00000379698 MYT1Q01538 1121 aa18.88■□□□□ 0.61
SH3KBP1-202ENST00000379698 ITGAEP38570 1179 aa18.88■□□□□ 0.61
SH3KBP1-202ENST00000379698 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms