RNA–Protein interactions for RNA: ENST00000355216.5

FOXN4-202, Transcript of forkhead box N4, humanhuman

TSL 2 BASIC

Gene FOXN4, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-202ENST00000355216 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
FOXN4-202ENST00000355216 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
FOXN4-202ENST00000355216 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
FOXN4-202ENST00000355216 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
FOXN4-202ENST00000355216 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
FOXN4-202ENST00000355216 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
FOXN4-202ENST00000355216 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
FOXN4-202ENST00000355216 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
FOXN4-202ENST00000355216 ABCC9O60706 1549 aa23.4■■□□□ 1.34
FOXN4-202ENST00000355216 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
FOXN4-202ENST00000355216 NACADO15069 1562 aa23.23■■□□□ 1.31
FOXN4-202ENST00000355216 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
FOXN4-202ENST00000355216 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
FOXN4-202ENST00000355216 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
FOXN4-202ENST00000355216 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
FOXN4-202ENST00000355216 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
FOXN4-202ENST00000355216 WIZO95785 1651 aa22.53■■□□□ 1.2
FOXN4-202ENST00000355216 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
FOXN4-202ENST00000355216 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
FOXN4-202ENST00000355216 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
FOXN4-202ENST00000355216 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
FOXN4-202ENST00000355216 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
FOXN4-202ENST00000355216 PABPN1Q86U42 306 aaKnown RBP eCLIP22.31■■□□□ 1.16
FOXN4-202ENST00000355216 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
FOXN4-202ENST00000355216 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
FOXN4-202ENST00000355216 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
FOXN4-202ENST00000355216 EIF4G1Q04637 1599 aaKnown RBP22.1■■□□□ 1.13
FOXN4-202ENST00000355216 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
FOXN4-202ENST00000355216 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
FOXN4-202ENST00000355216 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
FOXN4-202ENST00000355216 PEG3Q9GZU2 1588 aa21.95■■□□□ 1.1
FOXN4-202ENST00000355216 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
FOXN4-202ENST00000355216 EHMT2Q96KQ7 1210 aa21.88■■□□□ 1.09
FOXN4-202ENST00000355216 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
FOXN4-202ENST00000355216 HRCP23327 699 aa21.83■■□□□ 1.08
FOXN4-202ENST00000355216 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
FOXN4-202ENST00000355216 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
FOXN4-202ENST00000355216 SOGA1O94964 1423 aa21.63■■□□□ 1.05
FOXN4-202ENST00000355216 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
FOXN4-202ENST00000355216 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
FOXN4-202ENST00000355216 EEA1Q15075 1411 aa21.5■■□□□ 1.03
FOXN4-202ENST00000355216 NCAPD3P42695 1498 aa21.5■■□□□ 1.03
FOXN4-202ENST00000355216 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
FOXN4-202ENST00000355216 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
FOXN4-202ENST00000355216 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
FOXN4-202ENST00000355216 TNIKQ9UKE5 1360 aa21.39■■□□□ 1.02
FOXN4-202ENST00000355216 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.01
FOXN4-202ENST00000355216 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
FOXN4-202ENST00000355216 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
FOXN4-202ENST00000355216 GOLGA3Q08378 1498 aa21.31■■□□□ 1
FOXN4-202ENST00000355216 TOP2BQ02880 1626 aa21.28■■□□□ 1
FOXN4-202ENST00000355216 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
FOXN4-202ENST00000355216 CFTRP13569 1480 aa21.22■□□□□ 0.99
FOXN4-202ENST00000355216 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
FOXN4-202ENST00000355216 KIF21BO75037 1637 aa21.21■□□□□ 0.99
FOXN4-202ENST00000355216 CUX1P39880 1505 aa21.15■□□□□ 0.98
FOXN4-202ENST00000355216 ZEB1P37275 1124 aaPredicted RBP21.12■□□□□ 0.97
FOXN4-202ENST00000355216 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
FOXN4-202ENST00000355216 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
FOXN4-202ENST00000355216 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
FOXN4-202ENST00000355216 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
FOXN4-202ENST00000355216 CLIP1P30622 1438 aa21.04■□□□□ 0.96
FOXN4-202ENST00000355216 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
FOXN4-202ENST00000355216 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
FOXN4-202ENST00000355216 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
FOXN4-202ENST00000355216 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
FOXN4-202ENST00000355216 ERICH3Q5RHP9 1530 aa20.94■□□□□ 0.94
FOXN4-202ENST00000355216 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
FOXN4-202ENST00000355216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
FOXN4-202ENST00000355216 CCER1Q8TC90 406 aaPredicted RBP20.84■□□□□ 0.93
FOXN4-202ENST00000355216 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
FOXN4-202ENST00000355216 CUX2O14529 1486 aa20.82■□□□□ 0.92
FOXN4-202ENST00000355216 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
FOXN4-202ENST00000355216 IGF1RP08069 1367 aa20.78■□□□□ 0.92
FOXN4-202ENST00000355216 APLP2Q06481 763 aa20.78■□□□□ 0.92
FOXN4-202ENST00000355216 ARAP1Q96P48 1450 aa20.76■□□□□ 0.91
FOXN4-202ENST00000355216 NESP48681 1621 aa20.76■□□□□ 0.91
FOXN4-202ENST00000355216 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
FOXN4-202ENST00000355216 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
FOXN4-202ENST00000355216 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
FOXN4-202ENST00000355216 ARHGAP35Q9NRY4 1499 aa20.64■□□□□ 0.89
FOXN4-202ENST00000355216 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
FOXN4-202ENST00000355216 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
FOXN4-202ENST00000355216 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
FOXN4-202ENST00000355216 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
FOXN4-202ENST00000355216 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
FOXN4-202ENST00000355216 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
FOXN4-202ENST00000355216 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
FOXN4-202ENST00000355216 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
FOXN4-202ENST00000355216 PDS5BQ9NTI5 1447 aa20.5■□□□□ 0.87
FOXN4-202ENST00000355216 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
FOXN4-202ENST00000355216 CUL7Q14999 1698 aa20.41■□□□□ 0.86
FOXN4-202ENST00000355216 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
FOXN4-202ENST00000355216 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
FOXN4-202ENST00000355216 P3H3Q8IVL6 736 aa20.4■□□□□ 0.86
FOXN4-202ENST00000355216 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.86
FOXN4-202ENST00000355216 MAP3K1Q13233 1512 aa20.36■□□□□ 0.85
FOXN4-202ENST00000355216 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
FOXN4-202ENST00000355216 TIAM1Q13009 1591 aa20.35■□□□□ 0.85
FOXN4-202ENST00000355216 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms