RNA–Protein interactions for RNA: ENST00000355557.6

ZNF140-202, Transcript of zinc finger protein 140, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF140, Length 3,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140-202ENST00000355557 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
ZNF140-202ENST00000355557 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
ZNF140-202ENST00000355557 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
ZNF140-202ENST00000355557 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
ZNF140-202ENST00000355557 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
ZNF140-202ENST00000355557 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
ZNF140-202ENST00000355557 HRCP23327 699 aa21.12■□□□□ 0.97
ZNF140-202ENST00000355557 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
ZNF140-202ENST00000355557 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
ZNF140-202ENST00000355557 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
ZNF140-202ENST00000355557 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
ZNF140-202ENST00000355557 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
ZNF140-202ENST00000355557 FAM9AQ8IZU1 332 aaPredicted RBP20.29■□□□□ 0.84
ZNF140-202ENST00000355557 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
ZNF140-202ENST00000355557 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.82
ZNF140-202ENST00000355557 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
ZNF140-202ENST00000355557 TTBK1Q5TCY1 1321 aaPredicted RBP20.04■□□□□ 0.8
ZNF140-202ENST00000355557 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
ZNF140-202ENST00000355557 ABCC9O60706 1549 aa20■□□□□ 0.79
ZNF140-202ENST00000355557 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
ZNF140-202ENST00000355557 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
ZNF140-202ENST00000355557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
ZNF140-202ENST00000355557 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
ZNF140-202ENST00000355557 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
ZNF140-202ENST00000355557 CCER1Q8TC90 406 aaPredicted RBP19.73■□□□□ 0.75
ZNF140-202ENST00000355557 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
ZNF140-202ENST00000355557 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
ZNF140-202ENST00000355557 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
ZNF140-202ENST00000355557 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
ZNF140-202ENST00000355557 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
ZNF140-202ENST00000355557 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
ZNF140-202ENST00000355557 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
ZNF140-202ENST00000355557 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
ZNF140-202ENST00000355557 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
ZNF140-202ENST00000355557 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
ZNF140-202ENST00000355557 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
ZNF140-202ENST00000355557 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
ZNF140-202ENST00000355557 HNRNPUL2Q1KMD3 747 aaKnown RBP19.09■□□□□ 0.65
ZNF140-202ENST00000355557 MYT1Q01538 1121 aa19.09■□□□□ 0.65
ZNF140-202ENST00000355557 WIZO95785 1651 aa19.05■□□□□ 0.64
ZNF140-202ENST00000355557 UBTFP17480 764 aaKnown RBP19■□□□□ 0.63
ZNF140-202ENST00000355557 MIER1Q8N108 512 aa18.99■□□□□ 0.63
ZNF140-202ENST00000355557 ZNF316A6NFI3 1004 aaPredicted RBP18.96■□□□□ 0.63
ZNF140-202ENST00000355557 NACADO15069 1562 aa18.95■□□□□ 0.62
ZNF140-202ENST00000355557 BCANQ96GW7 911 aa18.82■□□□□ 0.6
ZNF140-202ENST00000355557 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
ZNF140-202ENST00000355557 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
ZNF140-202ENST00000355557 SOGA1O94964 1423 aa18.69■□□□□ 0.58
ZNF140-202ENST00000355557 APLP2Q06481 763 aa18.68■□□□□ 0.58
ZNF140-202ENST00000355557 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
ZNF140-202ENST00000355557 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
ZNF140-202ENST00000355557 ITGAEP38570 1179 aa18.61■□□□□ 0.57
ZNF140-202ENST00000355557 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
ZNF140-202ENST00000355557 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.55
ZNF140-202ENST00000355557 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
ZNF140-202ENST00000355557 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
ZNF140-202ENST00000355557 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
ZNF140-202ENST00000355557 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
ZNF140-202ENST00000355557 TOP2AP11388 1531 aaKnown RBP18.42■□□□□ 0.54
ZNF140-202ENST00000355557 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
ZNF140-202ENST00000355557 TSHZ2Q9NRE2 1034 aa18.39■□□□□ 0.53
ZNF140-202ENST00000355557 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
ZNF140-202ENST00000355557 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
ZNF140-202ENST00000355557 FKBP8Q14318 412 aa18.37■□□□□ 0.53
ZNF140-202ENST00000355557 ANP32EQ9BTT0 268 aa18.36■□□□□ 0.53
ZNF140-202ENST00000355557 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
ZNF140-202ENST00000355557 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
ZNF140-202ENST00000355557 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
ZNF140-202ENST00000355557 NEFLP07196 543 aa18.27■□□□□ 0.52
ZNF140-202ENST00000355557 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
ZNF140-202ENST00000355557 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
ZNF140-202ENST00000355557 ATP1B4Q9UN42 357 aaPredicted RBP18.23■□□□□ 0.51
ZNF140-202ENST00000355557 DDX10Q13206 875 aaKnown RBP18.23■□□□□ 0.51
ZNF140-202ENST00000355557 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
ZNF140-202ENST00000355557 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
ZNF140-202ENST00000355557 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
ZNF140-202ENST00000355557 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
ZNF140-202ENST00000355557 TNIKQ9UKE5 1360 aa18.16■□□□□ 0.5
ZNF140-202ENST00000355557 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
ZNF140-202ENST00000355557 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
ZNF140-202ENST00000355557 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
ZNF140-202ENST00000355557 CLIP1P30622 1438 aa18.07■□□□□ 0.48
ZNF140-202ENST00000355557 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
ZNF140-202ENST00000355557 RBM19Q9Y4C8 960 aaKnown RBP18.06■□□□□ 0.48
ZNF140-202ENST00000355557 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
ZNF140-202ENST00000355557 KANK4Q5T7N3 995 aaPredicted RBP18.04■□□□□ 0.48
ZNF140-202ENST00000355557 FAM50AQ14320 339 aaKnown RBP17.99■□□□□ 0.47
ZNF140-202ENST00000355557 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
ZNF140-202ENST00000355557 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
ZNF140-202ENST00000355557 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
ZNF140-202ENST00000355557 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
ZNF140-202ENST00000355557 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
ZNF140-202ENST00000355557 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
ZNF140-202ENST00000355557 ANP32CO43423 234 aa17.89■□□□□ 0.45
ZNF140-202ENST00000355557 EEA1Q15075 1411 aa17.87■□□□□ 0.45
ZNF140-202ENST00000355557 NBR1Q14596 966 aa17.87■□□□□ 0.45
ZNF140-202ENST00000355557 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
ZNF140-202ENST00000355557 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.45
ZNF140-202ENST00000355557 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
ZNF140-202ENST00000355557 MSH5O43196 834 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms