RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
SCN8A-208ENST00000599343 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
SCN8A-208ENST00000599343 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
SCN8A-208ENST00000599343 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
SCN8A-208ENST00000599343 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
SCN8A-208ENST00000599343 APLP2Q06481 763 aa18.51■□□□□ 0.55
SCN8A-208ENST00000599343 TTBK1Q5TCY1 1321 aaPredicted RBP18.45■□□□□ 0.54
SCN8A-208ENST00000599343 ERICH6Q7L0X2 663 aa18.38■□□□□ 0.53
SCN8A-208ENST00000599343 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
SCN8A-208ENST00000599343 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
SCN8A-208ENST00000599343 PCGF6Q9BYE7 350 aa18.29■□□□□ 0.52
SCN8A-208ENST00000599343 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
SCN8A-208ENST00000599343 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
SCN8A-208ENST00000599343 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
SCN8A-208ENST00000599343 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
SCN8A-208ENST00000599343 ATP1B4Q9UN42 357 aaPredicted RBP17.92■□□□□ 0.46
SCN8A-208ENST00000599343 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
SCN8A-208ENST00000599343 NEFLP07196 543 aa17.85■□□□□ 0.45
SCN8A-208ENST00000599343 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
SCN8A-208ENST00000599343 MYT1Q01538 1121 aa17.68■□□□□ 0.42
SCN8A-208ENST00000599343 UBTFP17480 764 aaKnown RBP17.66■□□□□ 0.42
SCN8A-208ENST00000599343 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
SCN8A-208ENST00000599343 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
SCN8A-208ENST00000599343 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
SCN8A-208ENST00000599343 ITGAEP38570 1179 aa17.31■□□□□ 0.36
SCN8A-208ENST00000599343 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
SCN8A-208ENST00000599343 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
SCN8A-208ENST00000599343 HRCP23327 699 aa17.26■□□□□ 0.35
SCN8A-208ENST00000599343 MYT1LQ9UL68 1186 aa17.22■□□□□ 0.35
SCN8A-208ENST00000599343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
SCN8A-208ENST00000599343 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
SCN8A-208ENST00000599343 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-208ENST00000599343 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
SCN8A-208ENST00000599343 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
SCN8A-208ENST00000599343 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
SCN8A-208ENST00000599343 LOC105371045A0A1W2PR82 267 aa17.03■□□□□ 0.32
SCN8A-208ENST00000599343 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
SCN8A-208ENST00000599343 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
SCN8A-208ENST00000599343 BCANQ96GW7 911 aa16.87■□□□□ 0.29
SCN8A-208ENST00000599343 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
SCN8A-208ENST00000599343 NEUROD1Q13562 356 aa16.72■□□□□ 0.27
SCN8A-208ENST00000599343 GTF3C3Q9Y5Q9 886 aa16.71■□□□□ 0.27
SCN8A-208ENST00000599343 TRIM52Q96A61 297 aa16.7■□□□□ 0.26
SCN8A-208ENST00000599343 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
SCN8A-208ENST00000599343 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
SCN8A-208ENST00000599343 ZNF326Q5BKZ1 582 aaKnown RBP16.61■□□□□ 0.25
SCN8A-208ENST00000599343 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
SCN8A-208ENST00000599343 ANP32CO43423 234 aa16.58■□□□□ 0.24
SCN8A-208ENST00000599343 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
SCN8A-208ENST00000599343 CANXP27824 592 aaKnown RBP16.52■□□□□ 0.23
SCN8A-208ENST00000599343 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
SCN8A-208ENST00000599343 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
SCN8A-208ENST00000599343 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
SCN8A-208ENST00000599343 ACIN1Q9UKV3 1341 aaKnown RBP16.32■□□□□ 0.2
SCN8A-208ENST00000599343 NEFMP07197 916 aa16.3■□□□□ 0.2
SCN8A-208ENST00000599343 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
SCN8A-208ENST00000599343 FBLN2P98095 1184 aa16.23■□□□□ 0.19
SCN8A-208ENST00000599343 FKBP8Q14318 412 aa16.22■□□□□ 0.19
SCN8A-208ENST00000599343 ANP32BQ92688 251 aaKnown RBP16.21■□□□□ 0.19
SCN8A-208ENST00000599343 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
SCN8A-208ENST00000599343 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
SCN8A-208ENST00000599343 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
SCN8A-208ENST00000599343 ZNF777Q9ULD5 760 aaPredicted RBP16.12■□□□□ 0.17
SCN8A-208ENST00000599343 ARXQ96QS3 562 aa16.11■□□□□ 0.17
SCN8A-208ENST00000599343 NBR1Q14596 966 aa16.11■□□□□ 0.17
SCN8A-208ENST00000599343 SALL2Q9Y467 1007 aaPredicted RBP16.09■□□□□ 0.17
SCN8A-208ENST00000599343 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCN8A-208ENST00000599343 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
SCN8A-208ENST00000599343 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
SCN8A-208ENST00000599343 GLIPR1L2Q4G1C9 344 aa16.02■□□□□ 0.15
SCN8A-208ENST00000599343 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
SCN8A-208ENST00000599343 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
SCN8A-208ENST00000599343 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
SCN8A-208ENST00000599343 CCDC136Q96JN2 1154 aa15.96■□□□□ 0.15
SCN8A-208ENST00000599343 PLPPR3Q6T4P5 718 aa15.95■□□□□ 0.14
SCN8A-208ENST00000599343 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
SCN8A-208ENST00000599343 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
SCN8A-208ENST00000599343 ABCC9O60706 1549 aa15.9■□□□□ 0.14
SCN8A-208ENST00000599343 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
SCN8A-208ENST00000599343 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
SCN8A-208ENST00000599343 ESF1Q9H501 851 aaKnown RBP15.88■□□□□ 0.13
SCN8A-208ENST00000599343 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
SCN8A-208ENST00000599343 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
SCN8A-208ENST00000599343 MRS2Q9HD23 443 aa15.81■□□□□ 0.12
SCN8A-208ENST00000599343 CHIC2Q9UKJ5 165 aa15.81■□□□□ 0.12
SCN8A-208ENST00000599343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCN8A-208ENST00000599343 HIRIP3Q9BW71 556 aaPredicted RBP15.77■□□□□ 0.11
SCN8A-208ENST00000599343 KDM2AQ9Y2K7 1162 aa15.77■□□□□ 0.11
SCN8A-208ENST00000599343 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.11
SCN8A-208ENST00000599343 MIER1Q8N108 512 aa15.73■□□□□ 0.11
SCN8A-208ENST00000599343 CDK11BP21127 795 aaKnown RBP15.73■□□□□ 0.11
SCN8A-208ENST00000599343 MYH16Q9H6N6 1097 aa15.73■□□□□ 0.11
SCN8A-208ENST00000599343 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
SCN8A-208ENST00000599343 A0A0G2JS52 829 aa15.69■□□□□ 0.1
SCN8A-208ENST00000599343 TRIM44Q96DX7 344 aaPredicted RBP15.69■□□□□ 0.1
SCN8A-208ENST00000599343 SENP3-EIF4A1A0A087X0R7 540 aa15.68■□□□□ 0.1
SCN8A-208ENST00000599343 PLEKHG5O94827 1062 aa15.68■□□□□ 0.1
SCN8A-208ENST00000599343 ZBTB7CA1YPR0 619 aa15.67■□□□□ 0.1
SCN8A-208ENST00000599343 NCLP19338 710 aaKnown RBP15.66■□□□□ 0.1
SCN8A-208ENST00000599343 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms