RNA–Protein interactions for RNA: ENST00000599078.1

LINC00664-203, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 3,760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-203ENST00000599078 NISCHQ9Y2I1 1504 aa24.87■■□□□ 1.57
LINC00664-203ENST00000599078 DCAF8L2P0C7V8 631 aa22.81■■□□□ 1.24
LINC00664-203ENST00000599078 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
LINC00664-203ENST00000599078 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
LINC00664-203ENST00000599078 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
LINC00664-203ENST00000599078 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
LINC00664-203ENST00000599078 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
LINC00664-203ENST00000599078 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
LINC00664-203ENST00000599078 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
LINC00664-203ENST00000599078 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
LINC00664-203ENST00000599078 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
LINC00664-203ENST00000599078 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
LINC00664-203ENST00000599078 HRCP23327 699 aa20.47■□□□□ 0.87
LINC00664-203ENST00000599078 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
LINC00664-203ENST00000599078 ABCC9O60706 1549 aa20.43■□□□□ 0.86
LINC00664-203ENST00000599078 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
LINC00664-203ENST00000599078 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
LINC00664-203ENST00000599078 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
LINC00664-203ENST00000599078 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
LINC00664-203ENST00000599078 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
LINC00664-203ENST00000599078 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
LINC00664-203ENST00000599078 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
LINC00664-203ENST00000599078 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
LINC00664-203ENST00000599078 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
LINC00664-203ENST00000599078 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
LINC00664-203ENST00000599078 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
LINC00664-203ENST00000599078 APLP2Q06481 763 aa19.84■□□□□ 0.77
LINC00664-203ENST00000599078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
LINC00664-203ENST00000599078 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
LINC00664-203ENST00000599078 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
LINC00664-203ENST00000599078 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
LINC00664-203ENST00000599078 NACADO15069 1562 aa19.47■□□□□ 0.71
LINC00664-203ENST00000599078 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
LINC00664-203ENST00000599078 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
LINC00664-203ENST00000599078 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
LINC00664-203ENST00000599078 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
LINC00664-203ENST00000599078 ITGAEP38570 1179 aa19.33■□□□□ 0.69
LINC00664-203ENST00000599078 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
LINC00664-203ENST00000599078 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
LINC00664-203ENST00000599078 WIZO95785 1651 aa19.25■□□□□ 0.67
LINC00664-203ENST00000599078 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
LINC00664-203ENST00000599078 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
LINC00664-203ENST00000599078 SOGA1O94964 1423 aa19.13■□□□□ 0.65
LINC00664-203ENST00000599078 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
LINC00664-203ENST00000599078 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
LINC00664-203ENST00000599078 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.63
LINC00664-203ENST00000599078 ZNF316A6NFI3 1004 aaPredicted RBP18.96■□□□□ 0.63
LINC00664-203ENST00000599078 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
LINC00664-203ENST00000599078 TNIKQ9UKE5 1360 aa18.94■□□□□ 0.62
LINC00664-203ENST00000599078 CLIP1P30622 1438 aa18.92■□□□□ 0.62
LINC00664-203ENST00000599078 GTF3C3Q9Y5Q9 886 aa18.91■□□□□ 0.62
LINC00664-203ENST00000599078 RUSC2Q8N2Y8 1516 aa18.89■□□□□ 0.62
LINC00664-203ENST00000599078 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
LINC00664-203ENST00000599078 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
LINC00664-203ENST00000599078 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
LINC00664-203ENST00000599078 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
LINC00664-203ENST00000599078 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
LINC00664-203ENST00000599078 EEA1Q15075 1411 aa18.86■□□□□ 0.61
LINC00664-203ENST00000599078 ACIN1Q9UKV3 1341 aaKnown RBP18.86■□□□□ 0.61
LINC00664-203ENST00000599078 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
LINC00664-203ENST00000599078 SMARCA4P51532 1647 aa18.83■□□□□ 0.6
LINC00664-203ENST00000599078 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
LINC00664-203ENST00000599078 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
LINC00664-203ENST00000599078 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
LINC00664-203ENST00000599078 MIER1Q8N108 512 aa18.67■□□□□ 0.58
LINC00664-203ENST00000599078 ATAD2BQ9ULI0 1458 aa18.63■□□□□ 0.57
LINC00664-203ENST00000599078 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
LINC00664-203ENST00000599078 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
LINC00664-203ENST00000599078 RAPGEF2Q9Y4G8 1499 aa18.57■□□□□ 0.56
LINC00664-203ENST00000599078 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
LINC00664-203ENST00000599078 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
LINC00664-203ENST00000599078 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
LINC00664-203ENST00000599078 TRIM52Q96A61 297 aa18.47■□□□□ 0.55
LINC00664-203ENST00000599078 HIRIP3Q9BW71 556 aaPredicted RBP18.46■□□□□ 0.55
LINC00664-203ENST00000599078 NEFLP07196 543 aa18.43■□□□□ 0.54
LINC00664-203ENST00000599078 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
LINC00664-203ENST00000599078 BCANQ96GW7 911 aa18.42■□□□□ 0.54
LINC00664-203ENST00000599078 CUX2O14529 1486 aa18.41■□□□□ 0.54
LINC00664-203ENST00000599078 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
LINC00664-203ENST00000599078 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
LINC00664-203ENST00000599078 FBLN2P98095 1184 aa18.35■□□□□ 0.53
LINC00664-203ENST00000599078 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
LINC00664-203ENST00000599078 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
LINC00664-203ENST00000599078 SIN3AQ96ST3 1273 aa18.34■□□□□ 0.53
LINC00664-203ENST00000599078 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
LINC00664-203ENST00000599078 CCNB3Q8WWL7 1395 aa18.32■□□□□ 0.52
LINC00664-203ENST00000599078 MTUS2Q5JR59 1369 aa18.27■□□□□ 0.51
LINC00664-203ENST00000599078 ANP32CO43423 234 aa18.27■□□□□ 0.51
LINC00664-203ENST00000599078 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
LINC00664-203ENST00000599078 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
LINC00664-203ENST00000599078 TONSLQ96HA7 1378 aa18.22■□□□□ 0.51
LINC00664-203ENST00000599078 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
LINC00664-203ENST00000599078 EIF4G1Q04637 1599 aaKnown RBP18.2■□□□□ 0.5
LINC00664-203ENST00000599078 KIF21BO75037 1637 aa18.2■□□□□ 0.5
LINC00664-203ENST00000599078 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
LINC00664-203ENST00000599078 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
LINC00664-203ENST00000599078 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
LINC00664-203ENST00000599078 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
LINC00664-203ENST00000599078 RAB3GAP2Q9H2M9 1393 aa18.15■□□□□ 0.5
LINC00664-203ENST00000599078 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms