RNA–Protein interactions for RNA: ENST00000373276.7

SH2D3C-202, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 3,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-202ENST00000373276 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
SH2D3C-202ENST00000373276 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
SH2D3C-202ENST00000373276 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
SH2D3C-202ENST00000373276 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
SH2D3C-202ENST00000373276 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
SH2D3C-202ENST00000373276 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
SH2D3C-202ENST00000373276 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
SH2D3C-202ENST00000373276 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
SH2D3C-202ENST00000373276 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
SH2D3C-202ENST00000373276 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
SH2D3C-202ENST00000373276 ABCC9O60706 1549 aa22.26■■□□□ 1.15
SH2D3C-202ENST00000373276 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
SH2D3C-202ENST00000373276 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
SH2D3C-202ENST00000373276 NACADO15069 1562 aa21.96■■□□□ 1.11
SH2D3C-202ENST00000373276 RB1CC1Q8TDY2 1594 aa21.89■■□□□ 1.1
SH2D3C-202ENST00000373276 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
SH2D3C-202ENST00000373276 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
SH2D3C-202ENST00000373276 HRCP23327 699 aa21.75■■□□□ 1.07
SH2D3C-202ENST00000373276 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
SH2D3C-202ENST00000373276 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
SH2D3C-202ENST00000373276 WIZO95785 1651 aa21.65■■□□□ 1.06
SH2D3C-202ENST00000373276 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
SH2D3C-202ENST00000373276 EHMT2Q96KQ7 1210 aa21.52■■□□□ 1.04
SH2D3C-202ENST00000373276 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
SH2D3C-202ENST00000373276 PPARGC1BQ86YN6 1023 aaKnown RBP21.42■■□□□ 1.02
SH2D3C-202ENST00000373276 TRIM26Q12899 539 aaPredicted RBP21.4■■□□□ 1.02
SH2D3C-202ENST00000373276 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
SH2D3C-202ENST00000373276 SMARCA4P51532 1647 aa21.3■■□□□ 1
SH2D3C-202ENST00000373276 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
SH2D3C-202ENST00000373276 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
SH2D3C-202ENST00000373276 PABPN1Q86U42 306 aaKnown RBP eCLIP21.23■□□□□ 0.99
SH2D3C-202ENST00000373276 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
SH2D3C-202ENST00000373276 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
SH2D3C-202ENST00000373276 SMARCA2P51531 1590 aa21.14■□□□□ 0.98
SH2D3C-202ENST00000373276 BICRAQ9NZM4 1560 aa21.09■□□□□ 0.97
SH2D3C-202ENST00000373276 SOGA1O94964 1423 aa20.92■□□□□ 0.94
SH2D3C-202ENST00000373276 ZEB1P37275 1124 aaPredicted RBP20.84■□□□□ 0.93
SH2D3C-202ENST00000373276 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.93
SH2D3C-202ENST00000373276 PEG3Q9GZU2 1588 aa20.82■□□□□ 0.92
SH2D3C-202ENST00000373276 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
SH2D3C-202ENST00000373276 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
SH2D3C-202ENST00000373276 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
SH2D3C-202ENST00000373276 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
SH2D3C-202ENST00000373276 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
SH2D3C-202ENST00000373276 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
SH2D3C-202ENST00000373276 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
SH2D3C-202ENST00000373276 EEA1Q15075 1411 aa20.68■□□□□ 0.9
SH2D3C-202ENST00000373276 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
SH2D3C-202ENST00000373276 TNIKQ9UKE5 1360 aa20.68■□□□□ 0.9
SH2D3C-202ENST00000373276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.66■□□□□ 0.9
SH2D3C-202ENST00000373276 GOLGA3Q08378 1498 aa20.61■□□□□ 0.89
SH2D3C-202ENST00000373276 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
SH2D3C-202ENST00000373276 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
SH2D3C-202ENST00000373276 KIF21BO75037 1637 aa20.45■□□□□ 0.86
SH2D3C-202ENST00000373276 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
SH2D3C-202ENST00000373276 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
SH2D3C-202ENST00000373276 CLIP1P30622 1438 aa20.39■□□□□ 0.86
SH2D3C-202ENST00000373276 TOP2BQ02880 1626 aa20.39■□□□□ 0.85
SH2D3C-202ENST00000373276 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
SH2D3C-202ENST00000373276 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
SH2D3C-202ENST00000373276 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
SH2D3C-202ENST00000373276 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.83
SH2D3C-202ENST00000373276 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
SH2D3C-202ENST00000373276 CUX1P39880 1505 aa20.23■□□□□ 0.83
SH2D3C-202ENST00000373276 APLP2Q06481 763 aa20.21■□□□□ 0.83
SH2D3C-202ENST00000373276 CFTRP13569 1480 aa20.16■□□□□ 0.82
SH2D3C-202ENST00000373276 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
SH2D3C-202ENST00000373276 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
SH2D3C-202ENST00000373276 KIF27Q86VH2 1401 aa20.1■□□□□ 0.81
SH2D3C-202ENST00000373276 DIEXFQ68CQ4 756 aaKnown RBP20.09■□□□□ 0.81
SH2D3C-202ENST00000373276 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
SH2D3C-202ENST00000373276 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
SH2D3C-202ENST00000373276 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
SH2D3C-202ENST00000373276 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
SH2D3C-202ENST00000373276 CUX2O14529 1486 aa19.96■□□□□ 0.79
SH2D3C-202ENST00000373276 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
SH2D3C-202ENST00000373276 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
SH2D3C-202ENST00000373276 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
SH2D3C-202ENST00000373276 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
SH2D3C-202ENST00000373276 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
SH2D3C-202ENST00000373276 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.78
SH2D3C-202ENST00000373276 IGF1RP08069 1367 aa19.89■□□□□ 0.77
SH2D3C-202ENST00000373276 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
SH2D3C-202ENST00000373276 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
SH2D3C-202ENST00000373276 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
SH2D3C-202ENST00000373276 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
SH2D3C-202ENST00000373276 ITGAEP38570 1179 aa19.78■□□□□ 0.76
SH2D3C-202ENST00000373276 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
SH2D3C-202ENST00000373276 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
SH2D3C-202ENST00000373276 NESP48681 1621 aa19.75■□□□□ 0.75
SH2D3C-202ENST00000373276 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
SH2D3C-202ENST00000373276 CENPBP07199 599 aaPredicted RBP19.73■□□□□ 0.75
SH2D3C-202ENST00000373276 P3H3Q8IVL6 736 aa19.73■□□□□ 0.75
SH2D3C-202ENST00000373276 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
SH2D3C-202ENST00000373276 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
SH2D3C-202ENST00000373276 MIER1Q8N108 512 aa19.69■□□□□ 0.74
SH2D3C-202ENST00000373276 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
SH2D3C-202ENST00000373276 TIAM1Q13009 1591 aa19.67■□□□□ 0.74
SH2D3C-202ENST00000373276 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
SH2D3C-202ENST00000373276 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms