Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PARPBPQ9NWS1 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.65□□□□□ -0.39
PARPBPQ9NWS1 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
PARPBPQ9NWS1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
PARPBPQ9NWS1 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
PARPBPQ9NWS1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.65□□□□□ -0.39
PARPBPQ9NWS1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
PARPBPQ9NWS1 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AC090643.2-201ENST00000623442 2029 ntBASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AC015909.3-201ENST00000572855 1794 ntBASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 SLC25A24P2-201ENST00000415059 510 ntBASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ACTG1P2-201ENST00000415776 1125 ntBASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ACTG1P11-201ENST00000425411 1125 ntBASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 CHCHD2P2-201ENST00000503744 321 ntBASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 AC138627.1-207ENST00000641560 1006 ntBASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.64□□□□□ -0.39
PARPBPQ9NWS1 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 LINC00115-201ENST00000473798 1317 ntBASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.63□□□□□ -0.39
PARPBPQ9NWS1 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms