RNA–Protein interactions for RNA: ENST00000309234.10

HFE-201, Transcript of homeostatic iron regulator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HFE, Length 1,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFE-201ENST00000309234 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
HFE-201ENST00000309234 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
HFE-201ENST00000309234 ABCC9O60706 1549 aa29.43■■■□□ 2.3
HFE-201ENST00000309234 ZCCHC6Q5VYS8 1495 aaKnown RBP28.57■■■□□ 2.16
HFE-201ENST00000309234 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
HFE-201ENST00000309234 NACADO15069 1562 aa28.37■■■□□ 2.13
HFE-201ENST00000309234 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
HFE-201ENST00000309234 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
HFE-201ENST00000309234 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
HFE-201ENST00000309234 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
HFE-201ENST00000309234 SCRIBQ14160 1630 aa27.7■■■□□ 2.03
HFE-201ENST00000309234 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
HFE-201ENST00000309234 BICRAQ9NZM4 1560 aa27.55■■■□□ 2
HFE-201ENST00000309234 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
HFE-201ENST00000309234 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
HFE-201ENST00000309234 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
HFE-201ENST00000309234 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
HFE-201ENST00000309234 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
HFE-201ENST00000309234 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
HFE-201ENST00000309234 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
HFE-201ENST00000309234 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
HFE-201ENST00000309234 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
HFE-201ENST00000309234 SMARCA2P51531 1590 aa26.22■■□□□ 1.79
HFE-201ENST00000309234 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
HFE-201ENST00000309234 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
HFE-201ENST00000309234 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.78
HFE-201ENST00000309234 WIZO95785 1651 aa26.16■■□□□ 1.78
HFE-201ENST00000309234 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
HFE-201ENST00000309234 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
HFE-201ENST00000309234 TOP2AP11388 1531 aaKnown RBP25.84■■□□□ 1.73
HFE-201ENST00000309234 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
HFE-201ENST00000309234 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
HFE-201ENST00000309234 NESP48681 1621 aa25.57■■□□□ 1.68
HFE-201ENST00000309234 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
HFE-201ENST00000309234 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
HFE-201ENST00000309234 CFTRP13569 1480 aa25.37■■□□□ 1.65
HFE-201ENST00000309234 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
HFE-201ENST00000309234 PDS5BQ9NTI5 1447 aa25.27■■□□□ 1.64
HFE-201ENST00000309234 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
HFE-201ENST00000309234 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
HFE-201ENST00000309234 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
HFE-201ENST00000309234 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
HFE-201ENST00000309234 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
HFE-201ENST00000309234 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
HFE-201ENST00000309234 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
HFE-201ENST00000309234 WDR62O43379 1518 aa24.92■■□□□ 1.58
HFE-201ENST00000309234 CUX2O14529 1486 aa24.88■■□□□ 1.57
HFE-201ENST00000309234 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
HFE-201ENST00000309234 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
HFE-201ENST00000309234 CUX1P39880 1505 aa24.76■■□□□ 1.55
HFE-201ENST00000309234 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
HFE-201ENST00000309234 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
HFE-201ENST00000309234 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
HFE-201ENST00000309234 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
HFE-201ENST00000309234 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
HFE-201ENST00000309234 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
HFE-201ENST00000309234 BIVM-ERCC5R4GMW8 1640 aa24.58■■□□□ 1.53
HFE-201ENST00000309234 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
HFE-201ENST00000309234 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
HFE-201ENST00000309234 SOGA1O94964 1423 aa24.53■■□□□ 1.52
HFE-201ENST00000309234 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
HFE-201ENST00000309234 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
HFE-201ENST00000309234 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
HFE-201ENST00000309234 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.5
HFE-201ENST00000309234 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
HFE-201ENST00000309234 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
HFE-201ENST00000309234 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
HFE-201ENST00000309234 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
HFE-201ENST00000309234 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
HFE-201ENST00000309234 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
HFE-201ENST00000309234 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
HFE-201ENST00000309234 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
HFE-201ENST00000309234 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
HFE-201ENST00000309234 SNAPC4Q5SXM2 1469 aa24.15■■□□□ 1.46
HFE-201ENST00000309234 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
HFE-201ENST00000309234 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
HFE-201ENST00000309234 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
HFE-201ENST00000309234 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
HFE-201ENST00000309234 FBLN2P98095 1184 aa24.05■■□□□ 1.44
HFE-201ENST00000309234 IGF1RP08069 1367 aa24.03■■□□□ 1.44
HFE-201ENST00000309234 CHD1O14646 1710 aa24.03■■□□□ 1.44
HFE-201ENST00000309234 ADAMTS12P58397 1594 aa24■■□□□ 1.43
HFE-201ENST00000309234 SYNJ2O15056 1496 aa24■■□□□ 1.43
HFE-201ENST00000309234 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
HFE-201ENST00000309234 FHAD1B1AJZ9 1412 aa23.96■■□□□ 1.43
HFE-201ENST00000309234 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
HFE-201ENST00000309234 CUL7Q14999 1698 aa23.89■■□□□ 1.42
HFE-201ENST00000309234 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
HFE-201ENST00000309234 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.41
HFE-201ENST00000309234 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
HFE-201ENST00000309234 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
HFE-201ENST00000309234 CSRNP3Q8WYN3 585 aa23.82■■□□□ 1.4
HFE-201ENST00000309234 EEA1Q15075 1411 aa23.81■■□□□ 1.4
HFE-201ENST00000309234 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
HFE-201ENST00000309234 NUP160Q12769 1436 aa23.77■■□□□ 1.4
HFE-201ENST00000309234 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
HFE-201ENST00000309234 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
HFE-201ENST00000309234 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
HFE-201ENST00000309234 KIAA0586Q9BVV6 1533 aa23.6■■□□□ 1.37
HFE-201ENST00000309234 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms