RNA–Protein interactions for RNA: ENST00000553648.2

AL358334.2-201, humanhuman

TSL 2 BASIC

Gene AL358334.2, Length 4,714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL358334.2-201ENST00000553648 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
AL358334.2-201ENST00000553648 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
AL358334.2-201ENST00000553648 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
AL358334.2-201ENST00000553648 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
AL358334.2-201ENST00000553648 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
AL358334.2-201ENST00000553648 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
AL358334.2-201ENST00000553648 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
AL358334.2-201ENST00000553648 FAM9AQ8IZU1 332 aaPredicted RBP20.69■□□□□ 0.9
AL358334.2-201ENST00000553648 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
AL358334.2-201ENST00000553648 APLP2Q06481 763 aa20.52■□□□□ 0.88
AL358334.2-201ENST00000553648 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
AL358334.2-201ENST00000553648 RANGAP1P46060 587 aaPredicted RBP20.21■□□□□ 0.83
AL358334.2-201ENST00000553648 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
AL358334.2-201ENST00000553648 ZEB1P37275 1124 aaPredicted RBP20.07■□□□□ 0.8
AL358334.2-201ENST00000553648 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
AL358334.2-201ENST00000553648 ERICH6Q7L0X2 663 aa20.04■□□□□ 0.8
AL358334.2-201ENST00000553648 YTHDC1Q96MU7 727 aaKnown RBP20.01■□□□□ 0.79
AL358334.2-201ENST00000553648 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
AL358334.2-201ENST00000553648 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
AL358334.2-201ENST00000553648 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
AL358334.2-201ENST00000553648 NEFLP07196 543 aa19.72■□□□□ 0.75
AL358334.2-201ENST00000553648 HRCP23327 699 aa19.66■□□□□ 0.74
AL358334.2-201ENST00000553648 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
AL358334.2-201ENST00000553648 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
AL358334.2-201ENST00000553648 MYT1Q01538 1121 aa19.53■□□□□ 0.72
AL358334.2-201ENST00000553648 ITGAEP38570 1179 aa19.4■□□□□ 0.7
AL358334.2-201ENST00000553648 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
AL358334.2-201ENST00000553648 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
AL358334.2-201ENST00000553648 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
AL358334.2-201ENST00000553648 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
AL358334.2-201ENST00000553648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
AL358334.2-201ENST00000553648 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
AL358334.2-201ENST00000553648 DAXXQ9UER7 740 aaPredicted RBP19.1■□□□□ 0.65
AL358334.2-201ENST00000553648 GTF3C3Q9Y5Q9 886 aa18.92■□□□□ 0.62
AL358334.2-201ENST00000553648 MYT1LQ9UL68 1186 aa18.9■□□□□ 0.62
AL358334.2-201ENST00000553648 BCANQ96GW7 911 aa18.89■□□□□ 0.61
AL358334.2-201ENST00000553648 RTL5Q5HYW3 569 aaPredicted RBP18.81■□□□□ 0.6
AL358334.2-201ENST00000553648 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
AL358334.2-201ENST00000553648 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
AL358334.2-201ENST00000553648 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
AL358334.2-201ENST00000553648 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
AL358334.2-201ENST00000553648 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
AL358334.2-201ENST00000553648 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
AL358334.2-201ENST00000553648 ACIN1Q9UKV3 1341 aaKnown RBP18.55■□□□□ 0.56
AL358334.2-201ENST00000553648 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.56
AL358334.2-201ENST00000553648 ANP32CO43423 234 aa18.52■□□□□ 0.55
AL358334.2-201ENST00000553648 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
AL358334.2-201ENST00000553648 BCL11AQ9H165 835 aa18.36■□□□□ 0.53
AL358334.2-201ENST00000553648 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
AL358334.2-201ENST00000553648 P3H3Q8IVL6 736 aa18.27■□□□□ 0.51
AL358334.2-201ENST00000553648 FKBP8Q14318 412 aa18.25■□□□□ 0.51
AL358334.2-201ENST00000553648 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
AL358334.2-201ENST00000553648 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
AL358334.2-201ENST00000553648 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
AL358334.2-201ENST00000553648 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
AL358334.2-201ENST00000553648 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
AL358334.2-201ENST00000553648 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
AL358334.2-201ENST00000553648 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
AL358334.2-201ENST00000553648 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
AL358334.2-201ENST00000553648 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
AL358334.2-201ENST00000553648 FBLN2P98095 1184 aa18.11■□□□□ 0.49
AL358334.2-201ENST00000553648 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
AL358334.2-201ENST00000553648 ABCC9O60706 1549 aa18.08■□□□□ 0.49
AL358334.2-201ENST00000553648 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
AL358334.2-201ENST00000553648 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
AL358334.2-201ENST00000553648 SALL2Q9Y467 1007 aaPredicted RBP18.04■□□□□ 0.48
AL358334.2-201ENST00000553648 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
AL358334.2-201ENST00000553648 MIER1Q8N108 512 aa17.97■□□□□ 0.47
AL358334.2-201ENST00000553648 NBR1Q14596 966 aa17.97■□□□□ 0.47
AL358334.2-201ENST00000553648 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
AL358334.2-201ENST00000553648 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
AL358334.2-201ENST00000553648 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
AL358334.2-201ENST00000553648 NEFMP07197 916 aa17.92■□□□□ 0.46
AL358334.2-201ENST00000553648 CCDC136Q96JN2 1154 aa17.89■□□□□ 0.45
AL358334.2-201ENST00000553648 ARXQ96QS3 562 aa17.85■□□□□ 0.45
AL358334.2-201ENST00000553648 HSP90AA1P07900 732 aaKnown RBP17.85■□□□□ 0.45
AL358334.2-201ENST00000553648 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
AL358334.2-201ENST00000553648 CHIC2Q9UKJ5 165 aa17.83■□□□□ 0.45
AL358334.2-201ENST00000553648 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
AL358334.2-201ENST00000553648 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
AL358334.2-201ENST00000553648 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
AL358334.2-201ENST00000553648 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
AL358334.2-201ENST00000553648 UPF2Q9HAU5 1272 aaKnown RBP17.76■□□□□ 0.43
AL358334.2-201ENST00000553648 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
AL358334.2-201ENST00000553648 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
AL358334.2-201ENST00000553648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
AL358334.2-201ENST00000553648 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.64■□□□□ 0.41
AL358334.2-201ENST00000553648 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
AL358334.2-201ENST00000553648 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.4
AL358334.2-201ENST00000553648 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
AL358334.2-201ENST00000553648 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
AL358334.2-201ENST00000553648 GLIPR1L2Q4G1C9 344 aa17.55■□□□□ 0.4
AL358334.2-201ENST00000553648 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
AL358334.2-201ENST00000553648 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
AL358334.2-201ENST00000553648 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
AL358334.2-201ENST00000553648 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
AL358334.2-201ENST00000553648 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
AL358334.2-201ENST00000553648 MTUS2Q5JR59 1369 aa17.49■□□□□ 0.39
AL358334.2-201ENST00000553648 TSPY4P0CV99 314 aa17.48■□□□□ 0.39
AL358334.2-201ENST00000553648 TSPY10P0CW01 314 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms