RNA–Protein interactions for RNA: ENST00000361786.6

CIPC-201, Transcript of CLOCK interacting pacemaker, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CIPC, Length 4,486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-201ENST00000361786 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
CIPC-201ENST00000361786 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
CIPC-201ENST00000361786 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
CIPC-201ENST00000361786 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
CIPC-201ENST00000361786 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
CIPC-201ENST00000361786 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
CIPC-201ENST00000361786 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
CIPC-201ENST00000361786 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
CIPC-201ENST00000361786 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
CIPC-201ENST00000361786 APLP2Q06481 763 aa21.69■■□□□ 1.06
CIPC-201ENST00000361786 ABCC9O60706 1549 aa21.55■■□□□ 1.04
CIPC-201ENST00000361786 PCGF6Q9BYE7 350 aa21.4■■□□□ 1.02
CIPC-201ENST00000361786 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
CIPC-201ENST00000361786 PABPN1Q86U42 306 aaKnown RBP eCLIP21.34■■□□□ 1.01
CIPC-201ENST00000361786 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1
CIPC-201ENST00000361786 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
CIPC-201ENST00000361786 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
CIPC-201ENST00000361786 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
CIPC-201ENST00000361786 CCER1Q8TC90 406 aaPredicted RBP20.88■□□□□ 0.93
CIPC-201ENST00000361786 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
CIPC-201ENST00000361786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
CIPC-201ENST00000361786 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
CIPC-201ENST00000361786 ITGAEP38570 1179 aa20.64■□□□□ 0.89
CIPC-201ENST00000361786 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
CIPC-201ENST00000361786 TRIM26Q12899 539 aaPredicted RBP20.53■□□□□ 0.88
CIPC-201ENST00000361786 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
CIPC-201ENST00000361786 SCRIBQ14160 1630 aa20.45■□□□□ 0.87
CIPC-201ENST00000361786 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
CIPC-201ENST00000361786 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
CIPC-201ENST00000361786 MYT1Q01538 1121 aa20.37■□□□□ 0.85
CIPC-201ENST00000361786 HRCP23327 699 aa20.35■□□□□ 0.85
CIPC-201ENST00000361786 FBLN2P98095 1184 aa20.31■□□□□ 0.84
CIPC-201ENST00000361786 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
CIPC-201ENST00000361786 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.81
CIPC-201ENST00000361786 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
CIPC-201ENST00000361786 FAM50AQ14320 339 aaKnown RBP20.13■□□□□ 0.81
CIPC-201ENST00000361786 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
CIPC-201ENST00000361786 POLR3GLQ9BT43 218 aa20.07■□□□□ 0.8
CIPC-201ENST00000361786 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
CIPC-201ENST00000361786 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
CIPC-201ENST00000361786 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
CIPC-201ENST00000361786 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
CIPC-201ENST00000361786 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
CIPC-201ENST00000361786 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.76
CIPC-201ENST00000361786 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
CIPC-201ENST00000361786 NACADO15069 1562 aa19.8■□□□□ 0.76
CIPC-201ENST00000361786 NEFLP07196 543 aa19.73■□□□□ 0.75
CIPC-201ENST00000361786 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
CIPC-201ENST00000361786 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
CIPC-201ENST00000361786 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
CIPC-201ENST00000361786 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
CIPC-201ENST00000361786 CDK11AQ9UQ88 783 aaPredicted RBP19.57■□□□□ 0.72
CIPC-201ENST00000361786 DIEXFQ68CQ4 756 aaKnown RBP19.57■□□□□ 0.72
CIPC-201ENST00000361786 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
CIPC-201ENST00000361786 CHMP7Q8WUX9 453 aaPredicted RBP19.54■□□□□ 0.72
CIPC-201ENST00000361786 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
CIPC-201ENST00000361786 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
CIPC-201ENST00000361786 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
CIPC-201ENST00000361786 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
CIPC-201ENST00000361786 CHIC2Q9UKJ5 165 aa19.4■□□□□ 0.7
CIPC-201ENST00000361786 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
CIPC-201ENST00000361786 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
CIPC-201ENST00000361786 CLIP1P30622 1438 aa19.34■□□□□ 0.69
CIPC-201ENST00000361786 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
CIPC-201ENST00000361786 MTUS2Q5JR59 1369 aa19.29■□□□□ 0.68
CIPC-201ENST00000361786 BCANQ96GW7 911 aa19.29■□□□□ 0.68
CIPC-201ENST00000361786 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
CIPC-201ENST00000361786 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
CIPC-201ENST00000361786 KCNH8Q96L42 1107 aa19.23■□□□□ 0.67
CIPC-201ENST00000361786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.67
CIPC-201ENST00000361786 CHGAP10645 457 aaKnown RBP19.23■□□□□ 0.67
CIPC-201ENST00000361786 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
CIPC-201ENST00000361786 ANP32CO43423 234 aa19.21■□□□□ 0.67
CIPC-201ENST00000361786 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
CIPC-201ENST00000361786 EEA1Q15075 1411 aa19.2■□□□□ 0.66
CIPC-201ENST00000361786 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
CIPC-201ENST00000361786 TSPY4P0CV99 314 aa19.19■□□□□ 0.66
CIPC-201ENST00000361786 TSPY10P0CW01 314 aa19.19■□□□□ 0.66
CIPC-201ENST00000361786 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
CIPC-201ENST00000361786 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
CIPC-201ENST00000361786 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.65
CIPC-201ENST00000361786 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
CIPC-201ENST00000361786 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
CIPC-201ENST00000361786 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
CIPC-201ENST00000361786 SOGA1O94964 1423 aa19.12■□□□□ 0.65
CIPC-201ENST00000361786 PLEKHD1A6NEE1 506 aa19.12■□□□□ 0.65
CIPC-201ENST00000361786 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
CIPC-201ENST00000361786 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
CIPC-201ENST00000361786 CUX2O14529 1486 aa19.05■□□□□ 0.64
CIPC-201ENST00000361786 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
CIPC-201ENST00000361786 KDM2AQ9Y2K7 1162 aa19.03■□□□□ 0.64
CIPC-201ENST00000361786 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
CIPC-201ENST00000361786 ABCC8Q09428 1581 aa19■□□□□ 0.63
CIPC-201ENST00000361786 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
CIPC-201ENST00000361786 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
CIPC-201ENST00000361786 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
CIPC-201ENST00000361786 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
CIPC-201ENST00000361786 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
CIPC-201ENST00000361786 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
CIPC-201ENST00000361786 WIZO95785 1651 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms