Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.4■□□□□ 0.22
IRX3P78415 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 KRT17P4-201ENST00000429445 819 ntBASIC16.4■□□□□ 0.22
IRX3P78415 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 AC008026.2-201ENST00000495438 348 ntBASIC16.4■□□□□ 0.22
IRX3P78415 IGHV1-12-201ENST00000518307 205 ntBASIC16.4■□□□□ 0.22
IRX3P78415 VENTXP3-201ENST00000546480 773 ntBASIC16.4■□□□□ 0.22
IRX3P78415 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 MIR6746-201ENST00000620971 63 ntBASIC16.4■□□□□ 0.22
IRX3P78415 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 ODCP-201ENST00000459650 1639 ntBASIC16.4■□□□□ 0.22
IRX3P78415 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC16.4■□□□□ 0.22
IRX3P78415 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
IRX3P78415 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
IRX3P78415 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IRX3P78415 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
IRX3P78415 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.39■□□□□ 0.21
IRX3P78415 C2-206ENST00000442278 2434 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 KRT8P18-201ENST00000413425 1445 ntBASIC16.39■□□□□ 0.21
IRX3P78415 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
IRX3P78415 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.39■□□□□ 0.21
IRX3P78415 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.39■□□□□ 0.21
IRX3P78415 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.39■□□□□ 0.21
IRX3P78415 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.39■□□□□ 0.21
IRX3P78415 RN7SL494P-201ENST00000461517 304 ntBASIC16.39■□□□□ 0.21
IRX3P78415 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 CHCHD2P2-201ENST00000503744 321 ntBASIC16.39■□□□□ 0.21
IRX3P78415 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 FAM86B3P-203ENST00000523992 854 ntBASIC16.39■□□□□ 0.21
IRX3P78415 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 DNM1P51-201ENST00000558149 522 ntBASIC16.39■□□□□ 0.21
IRX3P78415 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.39■□□□□ 0.21
IRX3P78415 MIR6074-201ENST00000612054 107 ntBASIC16.39■□□□□ 0.21
IRX3P78415 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
IRX3P78415 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX3P78415 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.39■□□□□ 0.21
IRX3P78415 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.38■□□□□ 0.21
IRX3P78415 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX3P78415 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX3P78415 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX3P78415 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX3P78415 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX3P78415 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX3P78415 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX3P78415 AC019109.1-201ENST00000401725 1874 ntBASIC16.38■□□□□ 0.21
IRX3P78415 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX3P78415 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms