RNA–Protein interactions for RNA: ENST00000546480.1

VENTXP3-201, Transcript of VENT homeobox pseudogene 3, humanhuman

BASIC

Gene VENTXP3, Length 773 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTXP3-201ENST00000546480 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
VENTXP3-201ENST00000546480 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
VENTXP3-201ENST00000546480 ABCC9O60706 1549 aa29.06■■■□□ 2.24
VENTXP3-201ENST00000546480 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
VENTXP3-201ENST00000546480 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
VENTXP3-201ENST00000546480 NACADO15069 1562 aa27.83■■■□□ 2.05
VENTXP3-201ENST00000546480 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
VENTXP3-201ENST00000546480 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
VENTXP3-201ENST00000546480 DCAF1Q9Y4B6 1507 aa27.47■■□□□ 1.99
VENTXP3-201ENST00000546480 UNC13AQ9UPW8 1703 aa27.31■■□□□ 1.96
VENTXP3-201ENST00000546480 PABPN1Q86U42 306 aaKnown RBP eCLIP27.15■■□□□ 1.94
VENTXP3-201ENST00000546480 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
VENTXP3-201ENST00000546480 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.91
VENTXP3-201ENST00000546480 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
VENTXP3-201ENST00000546480 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
VENTXP3-201ENST00000546480 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
VENTXP3-201ENST00000546480 CC2D2AQ9P2K1 1620 aa26.26■■□□□ 1.79
VENTXP3-201ENST00000546480 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.77
VENTXP3-201ENST00000546480 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
VENTXP3-201ENST00000546480 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
VENTXP3-201ENST00000546480 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
VENTXP3-201ENST00000546480 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
VENTXP3-201ENST00000546480 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
VENTXP3-201ENST00000546480 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
VENTXP3-201ENST00000546480 HMGXB3Q12766 1538 aa25.56■■□□□ 1.68
VENTXP3-201ENST00000546480 BAZ1BQ9UIG0 1483 aaKnown RBP25.55■■□□□ 1.68
VENTXP3-201ENST00000546480 PEG3Q9GZU2 1588 aa25.53■■□□□ 1.68
VENTXP3-201ENST00000546480 WIZO95785 1651 aa25.46■■□□□ 1.67
VENTXP3-201ENST00000546480 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
VENTXP3-201ENST00000546480 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.62
VENTXP3-201ENST00000546480 NESP48681 1621 aa25.12■■□□□ 1.61
VENTXP3-201ENST00000546480 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
VENTXP3-201ENST00000546480 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
VENTXP3-201ENST00000546480 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
VENTXP3-201ENST00000546480 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
VENTXP3-201ENST00000546480 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
VENTXP3-201ENST00000546480 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
VENTXP3-201ENST00000546480 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.56
VENTXP3-201ENST00000546480 CFTRP13569 1480 aa24.76■■□□□ 1.55
VENTXP3-201ENST00000546480 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
VENTXP3-201ENST00000546480 CUX2O14529 1486 aa24.72■■□□□ 1.55
VENTXP3-201ENST00000546480 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
VENTXP3-201ENST00000546480 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
VENTXP3-201ENST00000546480 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
VENTXP3-201ENST00000546480 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
VENTXP3-201ENST00000546480 WDR62O43379 1518 aa24.51■■□□□ 1.51
VENTXP3-201ENST00000546480 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
VENTXP3-201ENST00000546480 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
VENTXP3-201ENST00000546480 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
VENTXP3-201ENST00000546480 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
VENTXP3-201ENST00000546480 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
VENTXP3-201ENST00000546480 CUX1P39880 1505 aa24.09■■□□□ 1.45
VENTXP3-201ENST00000546480 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
VENTXP3-201ENST00000546480 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
VENTXP3-201ENST00000546480 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
VENTXP3-201ENST00000546480 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
VENTXP3-201ENST00000546480 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
VENTXP3-201ENST00000546480 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
VENTXP3-201ENST00000546480 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
VENTXP3-201ENST00000546480 SOGA1O94964 1423 aa23.98■■□□□ 1.43
VENTXP3-201ENST00000546480 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
VENTXP3-201ENST00000546480 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
VENTXP3-201ENST00000546480 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
VENTXP3-201ENST00000546480 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
VENTXP3-201ENST00000546480 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
VENTXP3-201ENST00000546480 TDRD9Q8NDG6 1382 aaKnown RBP23.86■■□□□ 1.41
VENTXP3-201ENST00000546480 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
VENTXP3-201ENST00000546480 ABCA10Q8WWZ4 1543 aa23.75■■□□□ 1.39
VENTXP3-201ENST00000546480 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
VENTXP3-201ENST00000546480 FBLN2P98095 1184 aa23.72■■□□□ 1.39
VENTXP3-201ENST00000546480 CHD1O14646 1710 aa23.71■■□□□ 1.39
VENTXP3-201ENST00000546480 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
VENTXP3-201ENST00000546480 SNAPC4Q5SXM2 1469 aa23.71■■□□□ 1.39
VENTXP3-201ENST00000546480 OSCARQ8IYS5 282 aa23.71■■□□□ 1.39
VENTXP3-201ENST00000546480 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
VENTXP3-201ENST00000546480 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.38
VENTXP3-201ENST00000546480 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
VENTXP3-201ENST00000546480 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
VENTXP3-201ENST00000546480 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
VENTXP3-201ENST00000546480 ADAMTS12P58397 1594 aa23.49■■□□□ 1.35
VENTXP3-201ENST00000546480 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
VENTXP3-201ENST00000546480 KIF27Q86VH2 1401 aa23.45■■□□□ 1.34
VENTXP3-201ENST00000546480 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
VENTXP3-201ENST00000546480 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
VENTXP3-201ENST00000546480 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
VENTXP3-201ENST00000546480 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
VENTXP3-201ENST00000546480 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
VENTXP3-201ENST00000546480 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
VENTXP3-201ENST00000546480 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
VENTXP3-201ENST00000546480 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
VENTXP3-201ENST00000546480 CUL7Q14999 1698 aa23.33■■□□□ 1.33
VENTXP3-201ENST00000546480 CEP170Q5SW79 1584 aa23.3■■□□□ 1.32
VENTXP3-201ENST00000546480 IGF1RP08069 1367 aa23.28■■□□□ 1.32
VENTXP3-201ENST00000546480 NUP160Q12769 1436 aa23.24■■□□□ 1.31
VENTXP3-201ENST00000546480 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
VENTXP3-201ENST00000546480 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
VENTXP3-201ENST00000546480 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
VENTXP3-201ENST00000546480 ARAP1Q96P48 1450 aa23.14■■□□□ 1.29
VENTXP3-201ENST00000546480 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
VENTXP3-201ENST00000546480 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms