RNA–Protein interactions for RNA: ENST00000542403.3

PAK6-203, Transcript of p21 (RAC1) activated kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAK6, Length 2,540 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK6-203ENST00000542403 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.82
PAK6-203ENST00000542403 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
PAK6-203ENST00000542403 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
PAK6-203ENST00000542403 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
PAK6-203ENST00000542403 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
PAK6-203ENST00000542403 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
PAK6-203ENST00000542403 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
PAK6-203ENST00000542403 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
PAK6-203ENST00000542403 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
PAK6-203ENST00000542403 ABCC9O60706 1549 aa26.13■■□□□ 1.77
PAK6-203ENST00000542403 SCRIBQ14160 1630 aa25.98■■□□□ 1.75
PAK6-203ENST00000542403 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
PAK6-203ENST00000542403 NACADO15069 1562 aa25.79■■□□□ 1.72
PAK6-203ENST00000542403 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
PAK6-203ENST00000542403 HRCP23327 699 aa25.59■■□□□ 1.69
PAK6-203ENST00000542403 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
PAK6-203ENST00000542403 PCGF6Q9BYE7 350 aa25.47■■□□□ 1.67
PAK6-203ENST00000542403 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
PAK6-203ENST00000542403 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
PAK6-203ENST00000542403 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
PAK6-203ENST00000542403 WIZO95785 1651 aa25.22■■□□□ 1.63
PAK6-203ENST00000542403 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
PAK6-203ENST00000542403 TRIM26Q12899 539 aaPredicted RBP25.14■■□□□ 1.62
PAK6-203ENST00000542403 EIF4G1Q04637 1599 aaKnown RBP24.98■■□□□ 1.59
PAK6-203ENST00000542403 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
PAK6-203ENST00000542403 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
PAK6-203ENST00000542403 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
PAK6-203ENST00000542403 TOP2AP11388 1531 aaKnown RBP24.92■■□□□ 1.58
PAK6-203ENST00000542403 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
PAK6-203ENST00000542403 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
PAK6-203ENST00000542403 CCDC88BA6NC98 1476 aa24.72■■□□□ 1.55
PAK6-203ENST00000542403 ZEB1P37275 1124 aaPredicted RBP24.67■■□□□ 1.54
PAK6-203ENST00000542403 BICRAQ9NZM4 1560 aa24.61■■□□□ 1.53
PAK6-203ENST00000542403 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
PAK6-203ENST00000542403 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
PAK6-203ENST00000542403 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
PAK6-203ENST00000542403 EEA1Q15075 1411 aa24.42■■□□□ 1.5
PAK6-203ENST00000542403 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
PAK6-203ENST00000542403 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
PAK6-203ENST00000542403 SOGA1O94964 1423 aa24.35■■□□□ 1.49
PAK6-203ENST00000542403 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
PAK6-203ENST00000542403 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
PAK6-203ENST00000542403 CSRNP3Q8WYN3 585 aa24.25■■□□□ 1.47
PAK6-203ENST00000542403 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
PAK6-203ENST00000542403 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
PAK6-203ENST00000542403 GOLGA3Q08378 1498 aa24.18■■□□□ 1.46
PAK6-203ENST00000542403 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
PAK6-203ENST00000542403 SYNJ1O43426 1573 aa24.14■■□□□ 1.45
PAK6-203ENST00000542403 KIF21BO75037 1637 aa24.08■■□□□ 1.45
PAK6-203ENST00000542403 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
PAK6-203ENST00000542403 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
PAK6-203ENST00000542403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
PAK6-203ENST00000542403 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
PAK6-203ENST00000542403 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
PAK6-203ENST00000542403 BIVM-ERCC5R4GMW8 1640 aa23.87■■□□□ 1.41
PAK6-203ENST00000542403 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
PAK6-203ENST00000542403 CLIP1P30622 1438 aa23.85■■□□□ 1.41
PAK6-203ENST00000542403 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
PAK6-203ENST00000542403 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
PAK6-203ENST00000542403 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
PAK6-203ENST00000542403 VPS8Q8N3P4 1428 aa23.78■■□□□ 1.4
PAK6-203ENST00000542403 ERICH3Q5RHP9 1530 aa23.71■■□□□ 1.39
PAK6-203ENST00000542403 PRXQ9BXM0 1461 aa23.64■■□□□ 1.38
PAK6-203ENST00000542403 CUX1P39880 1505 aa23.62■■□□□ 1.37
PAK6-203ENST00000542403 CFTRP13569 1480 aa23.61■■□□□ 1.37
PAK6-203ENST00000542403 APLP2Q06481 763 aa23.59■■□□□ 1.37
PAK6-203ENST00000542403 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
PAK6-203ENST00000542403 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
PAK6-203ENST00000542403 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
PAK6-203ENST00000542403 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
PAK6-203ENST00000542403 SCAF1Q9H7N4 1312 aaKnown RBP23.47■■□□□ 1.35
PAK6-203ENST00000542403 HNRNPUL2Q1KMD3 747 aaKnown RBP23.47■■□□□ 1.35
PAK6-203ENST00000542403 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
PAK6-203ENST00000542403 ZNF316A6NFI3 1004 aaPredicted RBP23.41■■□□□ 1.34
PAK6-203ENST00000542403 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
PAK6-203ENST00000542403 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
PAK6-203ENST00000542403 ARHGAP35Q9NRY4 1499 aa23.28■■□□□ 1.32
PAK6-203ENST00000542403 CENPBP07199 599 aaPredicted RBP23.27■■□□□ 1.32
PAK6-203ENST00000542403 CUX2O14529 1486 aa23.25■■□□□ 1.31
PAK6-203ENST00000542403 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
PAK6-203ENST00000542403 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
PAK6-203ENST00000542403 NEUROD1Q13562 356 aa23.24■■□□□ 1.31
PAK6-203ENST00000542403 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
PAK6-203ENST00000542403 IGF1RP08069 1367 aa23.23■■□□□ 1.31
PAK6-203ENST00000542403 FGD5Q6ZNL6 1462 aa23.19■■□□□ 1.3
PAK6-203ENST00000542403 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
PAK6-203ENST00000542403 DHX57Q6P158 1386 aaKnown RBP23.15■■□□□ 1.3
PAK6-203ENST00000542403 PELP1Q8IZL8 1130 aaKnown RBP23.14■■□□□ 1.3
PAK6-203ENST00000542403 MAP3K1Q13233 1512 aa23.14■■□□□ 1.29
PAK6-203ENST00000542403 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
PAK6-203ENST00000542403 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
PAK6-203ENST00000542403 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.28
PAK6-203ENST00000542403 TIAM1Q13009 1591 aa23.08■■□□□ 1.28
PAK6-203ENST00000542403 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
PAK6-203ENST00000542403 GTF3C3Q9Y5Q9 886 aa23.01■■□□□ 1.27
PAK6-203ENST00000542403 MIER1Q8N108 512 aa22.99■■□□□ 1.27
PAK6-203ENST00000542403 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
PAK6-203ENST00000542403 FHAD1B1AJZ9 1412 aa22.98■■□□□ 1.27
PAK6-203ENST00000542403 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
PAK6-203ENST00000542403 CFAP43Q8NDM7 1665 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms