RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 NISCHQ9Y2I1 1504 aa33.13■■■□□ 2.89
UBASH3A-203ENST00000398367 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
UBASH3A-203ENST00000398367 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
UBASH3A-203ENST00000398367 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
UBASH3A-203ENST00000398367 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
UBASH3A-203ENST00000398367 ABCC9O60706 1549 aa27.24■■□□□ 1.95
UBASH3A-203ENST00000398367 MYO15BQ96JP2 1530 aa27.15■■□□□ 1.94
UBASH3A-203ENST00000398367 NACADO15069 1562 aa26.93■■□□□ 1.9
UBASH3A-203ENST00000398367 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
UBASH3A-203ENST00000398367 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
UBASH3A-203ENST00000398367 SCRIBQ14160 1630 aa26.51■■□□□ 1.83
UBASH3A-203ENST00000398367 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
UBASH3A-203ENST00000398367 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
UBASH3A-203ENST00000398367 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
UBASH3A-203ENST00000398367 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
UBASH3A-203ENST00000398367 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
UBASH3A-203ENST00000398367 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
UBASH3A-203ENST00000398367 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
UBASH3A-203ENST00000398367 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
UBASH3A-203ENST00000398367 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
UBASH3A-203ENST00000398367 WIZO95785 1651 aa25.31■■□□□ 1.64
UBASH3A-203ENST00000398367 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
UBASH3A-203ENST00000398367 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.61
UBASH3A-203ENST00000398367 SMARCA2P51531 1590 aa25.06■■□□□ 1.6
UBASH3A-203ENST00000398367 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
UBASH3A-203ENST00000398367 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
UBASH3A-203ENST00000398367 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
UBASH3A-203ENST00000398367 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
UBASH3A-203ENST00000398367 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
UBASH3A-203ENST00000398367 CCDC88BA6NC98 1476 aa24.85■■□□□ 1.57
UBASH3A-203ENST00000398367 HMGXB3Q12766 1538 aa24.83■■□□□ 1.57
UBASH3A-203ENST00000398367 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
UBASH3A-203ENST00000398367 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
UBASH3A-203ENST00000398367 CFTRP13569 1480 aa24.3■■□□□ 1.48
UBASH3A-203ENST00000398367 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
UBASH3A-203ENST00000398367 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
UBASH3A-203ENST00000398367 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.47
UBASH3A-203ENST00000398367 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
UBASH3A-203ENST00000398367 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
UBASH3A-203ENST00000398367 TOP2BQ02880 1626 aa24■■□□□ 1.43
UBASH3A-203ENST00000398367 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
UBASH3A-203ENST00000398367 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
UBASH3A-203ENST00000398367 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
UBASH3A-203ENST00000398367 EEA1Q15075 1411 aa23.93■■□□□ 1.42
UBASH3A-203ENST00000398367 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
UBASH3A-203ENST00000398367 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
UBASH3A-203ENST00000398367 CUX1P39880 1505 aa23.9■■□□□ 1.42
UBASH3A-203ENST00000398367 NESP48681 1621 aa23.9■■□□□ 1.42
UBASH3A-203ENST00000398367 SOGA1O94964 1423 aa23.86■■□□□ 1.41
UBASH3A-203ENST00000398367 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
UBASH3A-203ENST00000398367 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.41
UBASH3A-203ENST00000398367 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
UBASH3A-203ENST00000398367 CSRNP3Q8WYN3 585 aa23.73■■□□□ 1.39
UBASH3A-203ENST00000398367 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
UBASH3A-203ENST00000398367 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
UBASH3A-203ENST00000398367 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
UBASH3A-203ENST00000398367 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
UBASH3A-203ENST00000398367 KIF27Q86VH2 1401 aa23.62■■□□□ 1.37
UBASH3A-203ENST00000398367 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
UBASH3A-203ENST00000398367 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
UBASH3A-203ENST00000398367 KIF21BO75037 1637 aa23.56■■□□□ 1.36
UBASH3A-203ENST00000398367 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
UBASH3A-203ENST00000398367 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
UBASH3A-203ENST00000398367 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
UBASH3A-203ENST00000398367 CUX2O14529 1486 aa23.51■■□□□ 1.35
UBASH3A-203ENST00000398367 MRC2Q9UBG0 1479 aa23.51■■□□□ 1.35
UBASH3A-203ENST00000398367 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
UBASH3A-203ENST00000398367 TNIKQ9UKE5 1360 aa23.48■■□□□ 1.35
UBASH3A-203ENST00000398367 PRXQ9BXM0 1461 aa23.44■■□□□ 1.34
UBASH3A-203ENST00000398367 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
UBASH3A-203ENST00000398367 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
UBASH3A-203ENST00000398367 ERCC6Q03468 1493 aa23.41■■□□□ 1.34
UBASH3A-203ENST00000398367 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
UBASH3A-203ENST00000398367 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
UBASH3A-203ENST00000398367 WDR62O43379 1518 aa23.38■■□□□ 1.33
UBASH3A-203ENST00000398367 IGF1RP08069 1367 aa23.36■■□□□ 1.33
UBASH3A-203ENST00000398367 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
UBASH3A-203ENST00000398367 CEP162Q5TB80 1403 aa23.33■■□□□ 1.33
UBASH3A-203ENST00000398367 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
UBASH3A-203ENST00000398367 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
UBASH3A-203ENST00000398367 CARMIL1Q5VZK9 1371 aa23.26■■□□□ 1.31
UBASH3A-203ENST00000398367 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
UBASH3A-203ENST00000398367 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
UBASH3A-203ENST00000398367 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
UBASH3A-203ENST00000398367 CUL7Q14999 1698 aa23.21■■□□□ 1.31
UBASH3A-203ENST00000398367 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
UBASH3A-203ENST00000398367 CLIP1P30622 1438 aa23.16■■□□□ 1.3
UBASH3A-203ENST00000398367 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.28
UBASH3A-203ENST00000398367 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
UBASH3A-203ENST00000398367 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
UBASH3A-203ENST00000398367 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
UBASH3A-203ENST00000398367 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
UBASH3A-203ENST00000398367 EIF4G3O43432 1585 aaKnown RBP22.98■■□□□ 1.27
UBASH3A-203ENST00000398367 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
UBASH3A-203ENST00000398367 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
UBASH3A-203ENST00000398367 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
UBASH3A-203ENST00000398367 ARAP1Q96P48 1450 aa22.9■■□□□ 1.26
UBASH3A-203ENST00000398367 ARHGAP35Q9NRY4 1499 aa22.9■■□□□ 1.26
UBASH3A-203ENST00000398367 CTTNBP2Q8WZ74 1663 aa22.89■■□□□ 1.25
UBASH3A-203ENST00000398367 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms