Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.84■□□□□ 0.29
CHGBP05060 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.84■□□□□ 0.29
CHGBP05060 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.84■□□□□ 0.29
CHGBP05060 ERP29P1-201ENST00000442902 706 ntBASIC16.84■□□□□ 0.29
CHGBP05060 FTLP1-201ENST00000449155 526 ntBASIC16.84■□□□□ 0.29
CHGBP05060 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.84■□□□□ 0.29
CHGBP05060 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
CHGBP05060 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CHGBP05060 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.84■□□□□ 0.29
CHGBP05060 HERC2P11-201ENST00000562845 725 ntBASIC16.84■□□□□ 0.29
CHGBP05060 AC135983.4-201ENST00000564116 1262 ntBASIC16.84■□□□□ 0.29
CHGBP05060 AC100756.2-201ENST00000569537 736 ntBASIC16.84■□□□□ 0.29
CHGBP05060 MIR2392-201ENST00000584881 84 ntBASIC16.84■□□□□ 0.29
CHGBP05060 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.84■□□□□ 0.29
CHGBP05060 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.84■□□□□ 0.29
CHGBP05060 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHGBP05060 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.84■□□□□ 0.29
CHGBP05060 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.83■□□□□ 0.29
CHGBP05060 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHGBP05060 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHGBP05060 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.83■□□□□ 0.29
CHGBP05060 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHGBP05060 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHGBP05060 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.83■□□□□ 0.28
CHGBP05060 NOC2LP1-201ENST00000450578 752 ntBASIC16.83■□□□□ 0.28
CHGBP05060 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.83■□□□□ 0.28
CHGBP05060 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 RN7SL81P-201ENST00000493781 261 ntBASIC16.83■□□□□ 0.28
CHGBP05060 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.83■□□□□ 0.28
CHGBP05060 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.83■□□□□ 0.28
CHGBP05060 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.83■□□□□ 0.28
CHGBP05060 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 MIR5572-201ENST00000583188 137 ntBASIC16.83■□□□□ 0.28
CHGBP05060 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 AC107464.3-201ENST00000609172 737 ntBASIC16.83■□□□□ 0.28
CHGBP05060 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHGBP05060 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.83■□□□□ 0.28
CHGBP05060 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CHGBP05060 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHGBP05060 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHGBP05060 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHGBP05060 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
CHGBP05060 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHGBP05060 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 ODCP-201ENST00000459650 1639 ntBASIC16.82■□□□□ 0.28
CHGBP05060 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHGBP05060 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CHGBP05060 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.82■□□□□ 0.28
CHGBP05060 HIST2H2BA-201ENST00000412169 381 ntBASIC16.82■□□□□ 0.28
CHGBP05060 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.82■□□□□ 0.28
CHGBP05060 AC092573.1-201ENST00000433054 884 ntBASIC16.82■□□□□ 0.28
CHGBP05060 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.82■□□□□ 0.28
CHGBP05060 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.82■□□□□ 0.28
CHGBP05060 RPL18AP3-201ENST00000462885 528 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms