RNA–Protein interactions for RNA: ENST00000361483.4

FAM109A-201, Transcript of Sesquipedalian-1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene FAM109A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM109A-201ENST00000361483 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.87
FAM109A-201ENST00000361483 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
FAM109A-201ENST00000361483 SUPT5HO00267 1087 aaKnown RBP24.39■■□□□ 1.49
FAM109A-201ENST00000361483 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
FAM109A-201ENST00000361483 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
FAM109A-201ENST00000361483 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
FAM109A-201ENST00000361483 HRCP23327 699 aa23.56■■□□□ 1.36
FAM109A-201ENST00000361483 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.33
FAM109A-201ENST00000361483 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
FAM109A-201ENST00000361483 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
FAM109A-201ENST00000361483 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
FAM109A-201ENST00000361483 FAM9AQ8IZU1 332 aaPredicted RBP22.75■■□□□ 1.23
FAM109A-201ENST00000361483 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
FAM109A-201ENST00000361483 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
FAM109A-201ENST00000361483 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
FAM109A-201ENST00000361483 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
FAM109A-201ENST00000361483 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
FAM109A-201ENST00000361483 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
FAM109A-201ENST00000361483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
FAM109A-201ENST00000361483 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.11
FAM109A-201ENST00000361483 CCER1Q8TC90 406 aaPredicted RBP21.96■■□□□ 1.11
FAM109A-201ENST00000361483 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
FAM109A-201ENST00000361483 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
FAM109A-201ENST00000361483 PELP1Q8IZL8 1130 aaKnown RBP21.88■■□□□ 1.09
FAM109A-201ENST00000361483 YTHDC1Q96MU7 727 aaKnown RBP21.84■■□□□ 1.09
FAM109A-201ENST00000361483 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
FAM109A-201ENST00000361483 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
FAM109A-201ENST00000361483 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
FAM109A-201ENST00000361483 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
FAM109A-201ENST00000361483 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
FAM109A-201ENST00000361483 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
FAM109A-201ENST00000361483 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
FAM109A-201ENST00000361483 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
FAM109A-201ENST00000361483 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
FAM109A-201ENST00000361483 ABCC9O60706 1549 aa21.36■■□□□ 1.01
FAM109A-201ENST00000361483 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
FAM109A-201ENST00000361483 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
FAM109A-201ENST00000361483 MIER1Q8N108 512 aa21.24■□□□□ 0.99
FAM109A-201ENST00000361483 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
FAM109A-201ENST00000361483 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.97
FAM109A-201ENST00000361483 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
FAM109A-201ENST00000361483 WIZO95785 1651 aa21■□□□□ 0.95
FAM109A-201ENST00000361483 SOGA1O94964 1423 aa20.98■□□□□ 0.95
FAM109A-201ENST00000361483 CEP162Q5TB80 1403 aa20.97■□□□□ 0.95
FAM109A-201ENST00000361483 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
FAM109A-201ENST00000361483 RUSC2Q8N2Y8 1516 aa20.9■□□□□ 0.94
FAM109A-201ENST00000361483 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
FAM109A-201ENST00000361483 BCANQ96GW7 911 aa20.83■□□□□ 0.92
FAM109A-201ENST00000361483 APLP2Q06481 763 aa20.82■□□□□ 0.92
FAM109A-201ENST00000361483 ITGAEP38570 1179 aa20.82■□□□□ 0.92
FAM109A-201ENST00000361483 MYT1Q01538 1121 aa20.74■□□□□ 0.91
FAM109A-201ENST00000361483 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
FAM109A-201ENST00000361483 KCNH8Q96L42 1107 aa20.67■□□□□ 0.9
FAM109A-201ENST00000361483 SUPT16HQ9Y5B9 1047 aaKnown RBP20.65■□□□□ 0.9
FAM109A-201ENST00000361483 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.89
FAM109A-201ENST00000361483 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
FAM109A-201ENST00000361483 HIRIP3Q9BW71 556 aaPredicted RBP20.53■□□□□ 0.88
FAM109A-201ENST00000361483 CLIP1P30622 1438 aa20.49■□□□□ 0.87
FAM109A-201ENST00000361483 TSHZ2Q9NRE2 1034 aa20.47■□□□□ 0.87
FAM109A-201ENST00000361483 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
FAM109A-201ENST00000361483 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
FAM109A-201ENST00000361483 KANK4Q5T7N3 995 aaPredicted RBP20.44■□□□□ 0.86
FAM109A-201ENST00000361483 FKBP8Q14318 412 aa20.4■□□□□ 0.86
FAM109A-201ENST00000361483 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
FAM109A-201ENST00000361483 NACADO15069 1562 aa20.37■□□□□ 0.85
FAM109A-201ENST00000361483 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
FAM109A-201ENST00000361483 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
FAM109A-201ENST00000361483 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
FAM109A-201ENST00000361483 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
FAM109A-201ENST00000361483 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
FAM109A-201ENST00000361483 TOP2AP11388 1531 aaKnown RBP20.28■□□□□ 0.84
FAM109A-201ENST00000361483 DHX57Q6P158 1386 aaKnown RBP20.28■□□□□ 0.84
FAM109A-201ENST00000361483 ANP32EQ9BTT0 268 aa20.26■□□□□ 0.83
FAM109A-201ENST00000361483 VPS8Q8N3P4 1428 aa20.25■□□□□ 0.83
FAM109A-201ENST00000361483 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
FAM109A-201ENST00000361483 IRX6P78412 446 aaPredicted RBP20.23■□□□□ 0.83
FAM109A-201ENST00000361483 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.83
FAM109A-201ENST00000361483 EEA1Q15075 1411 aa20.2■□□□□ 0.82
FAM109A-201ENST00000361483 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
FAM109A-201ENST00000361483 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
FAM109A-201ENST00000361483 P3H3Q8IVL6 736 aa20.17■□□□□ 0.82
FAM109A-201ENST00000361483 BCL11AQ9H165 835 aa20.17■□□□□ 0.82
FAM109A-201ENST00000361483 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
FAM109A-201ENST00000361483 NEFLP07196 543 aa20.11■□□□□ 0.81
FAM109A-201ENST00000361483 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
FAM109A-201ENST00000361483 KIF21BO75037 1637 aa20.07■□□□□ 0.8
FAM109A-201ENST00000361483 RBM19Q9Y4C8 960 aaKnown RBP20.06■□□□□ 0.8
FAM109A-201ENST00000361483 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
FAM109A-201ENST00000361483 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
FAM109A-201ENST00000361483 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
FAM109A-201ENST00000361483 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
FAM109A-201ENST00000361483 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
FAM109A-201ENST00000361483 ANP32CO43423 234 aa19.91■□□□□ 0.78
FAM109A-201ENST00000361483 HNRNPUQ00839 825 aaKnown RBP eCLIP19.88■□□□□ 0.77
FAM109A-201ENST00000361483 ERICH6Q7L0X2 663 aa19.88■□□□□ 0.77
FAM109A-201ENST00000361483 MSH5O43196 834 aa19.87■□□□□ 0.77
FAM109A-201ENST00000361483 UNC13AQ9UPW8 1703 aa19.83■□□□□ 0.76
FAM109A-201ENST00000361483 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
FAM109A-201ENST00000361483 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
FAM109A-201ENST00000361483 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms