RNA–Protein interactions for RNA: ENST00000526811.4

IFITM3-202, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFITM3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-202ENST00000526811 NISCHQ9Y2I1 1504 aa36.6■■■■□ 3.45
IFITM3-202ENST00000526811 ABCC9O60706 1549 aa34.07■■■■□ 3.04
IFITM3-202ENST00000526811 CCDC180Q9P1Z9 1646 aa33.14■■■□□ 2.9
IFITM3-202ENST00000526811 DNAJC5BQ9UF47 199 aa32.83■■■□□ 2.85
IFITM3-202ENST00000526811 RB1CC1Q8TDY2 1594 aa32.01■■■□□ 2.71
IFITM3-202ENST00000526811 PABPN1Q86U42 306 aaKnown RBP eCLIP31.64■■■□□ 2.66
IFITM3-202ENST00000526811 NACADO15069 1562 aa31.6■■■□□ 2.65
IFITM3-202ENST00000526811 DCAF8L2P0C7V8 631 aa31.31■■■□□ 2.6
IFITM3-202ENST00000526811 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
IFITM3-202ENST00000526811 BICRAQ9NZM4 1560 aa31.14■■■□□ 2.58
IFITM3-202ENST00000526811 MYO15BQ96JP2 1530 aa30.9■■■□□ 2.54
IFITM3-202ENST00000526811 CECR2Q9BXF3 1484 aa30.8■■■□□ 2.52
IFITM3-202ENST00000526811 DNAJC5Q9H3Z4 198 aa30.79■■■□□ 2.52
IFITM3-202ENST00000526811 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.51
IFITM3-202ENST00000526811 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
IFITM3-202ENST00000526811 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
IFITM3-202ENST00000526811 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
IFITM3-202ENST00000526811 SCRIBQ14160 1630 aa30.16■■■□□ 2.42
IFITM3-202ENST00000526811 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
IFITM3-202ENST00000526811 CUX2O14529 1486 aa29.73■■■□□ 2.35
IFITM3-202ENST00000526811 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
IFITM3-202ENST00000526811 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
IFITM3-202ENST00000526811 NESP48681 1621 aa29.02■■■□□ 2.24
IFITM3-202ENST00000526811 TRIM41Q8WV44 630 aa29.02■■■□□ 2.24
IFITM3-202ENST00000526811 ATAD2BQ9ULI0 1458 aa29■■■□□ 2.23
IFITM3-202ENST00000526811 HMGXB3Q12766 1538 aa28.87■■■□□ 2.21
IFITM3-202ENST00000526811 THOC2Q8NI27 1593 aaKnown RBP28.86■■■□□ 2.21
IFITM3-202ENST00000526811 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
IFITM3-202ENST00000526811 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
IFITM3-202ENST00000526811 LAMC3Q9Y6N6 1575 aa28.65■■■□□ 2.18
IFITM3-202ENST00000526811 BAZ1BQ9UIG0 1483 aaKnown RBP28.64■■■□□ 2.17
IFITM3-202ENST00000526811 PDS5BQ9NTI5 1447 aa28.57■■■□□ 2.16
IFITM3-202ENST00000526811 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
IFITM3-202ENST00000526811 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
IFITM3-202ENST00000526811 BAZ1AQ9NRL2 1556 aaPredicted RBP28.44■■■□□ 2.14
IFITM3-202ENST00000526811 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
IFITM3-202ENST00000526811 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
IFITM3-202ENST00000526811 WDR62O43379 1518 aa28.29■■■□□ 2.12
IFITM3-202ENST00000526811 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
IFITM3-202ENST00000526811 MROH2BQ7Z745 1585 aa28.19■■■□□ 2.1
IFITM3-202ENST00000526811 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
IFITM3-202ENST00000526811 FANCD2Q9BXW9 1451 aa27.95■■■□□ 2.06
IFITM3-202ENST00000526811 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
IFITM3-202ENST00000526811 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
IFITM3-202ENST00000526811 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
IFITM3-202ENST00000526811 CFTRP13569 1480 aa27.79■■■□□ 2.04
IFITM3-202ENST00000526811 URB2Q14146 1524 aaKnown RBP27.78■■■□□ 2.04
IFITM3-202ENST00000526811 WIZO95785 1651 aa27.77■■■□□ 2.04
IFITM3-202ENST00000526811 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
IFITM3-202ENST00000526811 CYB5RLQ6IPT4 315 aa27.67■■■□□ 2.02
IFITM3-202ENST00000526811 TRHP20396 242 aaPredicted RBP27.63■■■□□ 2.01
IFITM3-202ENST00000526811 ZNF608Q9ULD9 1512 aaPredicted RBP27.59■■■□□ 2.01
IFITM3-202ENST00000526811 IFT140Q96RY7 1462 aa27.54■■■□□ 2
IFITM3-202ENST00000526811 AEBP2Q6ZN18 517 aaPredicted RBP27.46■■□□□ 1.99
IFITM3-202ENST00000526811 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
IFITM3-202ENST00000526811 TOP2AP11388 1531 aaKnown RBP27.36■■□□□ 1.97
IFITM3-202ENST00000526811 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
IFITM3-202ENST00000526811 RSF1Q96T23 1441 aaPredicted RBP27.32■■□□□ 1.96
IFITM3-202ENST00000526811 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
IFITM3-202ENST00000526811 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
IFITM3-202ENST00000526811 CHD1O14646 1710 aa27.26■■□□□ 1.95
IFITM3-202ENST00000526811 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.951e-6■■■■■ 29.8
IFITM3-202ENST00000526811 FBLN2P98095 1184 aa27.24■■□□□ 1.95
IFITM3-202ENST00000526811 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
IFITM3-202ENST00000526811 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
IFITM3-202ENST00000526811 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
IFITM3-202ENST00000526811 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
IFITM3-202ENST00000526811 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
IFITM3-202ENST00000526811 POLA1P09884 1462 aaPredicted RBP26.99■■□□□ 1.91
IFITM3-202ENST00000526811 TDRD9Q8NDG6 1382 aaKnown RBP26.95■■□□□ 1.9
IFITM3-202ENST00000526811 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
IFITM3-202ENST00000526811 CHMP7Q8WUX9 453 aaPredicted RBP26.92■■□□□ 1.9
IFITM3-202ENST00000526811 SNAPC4Q5SXM2 1469 aa26.9■■□□□ 1.9
IFITM3-202ENST00000526811 SOGA1O94964 1423 aa26.88■■□□□ 1.89
IFITM3-202ENST00000526811 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
IFITM3-202ENST00000526811 GAPVD1Q14C86 1478 aa26.8■■□□□ 1.88
IFITM3-202ENST00000526811 MAGI1Q96QZ7 1491 aaPredicted RBP26.8■■□□□ 1.88
IFITM3-202ENST00000526811 WDR97A6NE52 1622 aa26.77■■□□□ 1.88
IFITM3-202ENST00000526811 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
IFITM3-202ENST00000526811 GRIN2BQ13224 1484 aa26.73■■□□□ 1.87
IFITM3-202ENST00000526811 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
IFITM3-202ENST00000526811 CUX1P39880 1505 aa26.53■■□□□ 1.84
IFITM3-202ENST00000526811 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
IFITM3-202ENST00000526811 PBRM1Q86U86 1689 aa26.46■■□□□ 1.83
IFITM3-202ENST00000526811 ILDR1Q86SU0 546 aaPredicted RBP26.41■■□□□ 1.82
IFITM3-202ENST00000526811 CEP170Q5SW79 1584 aa26.38■■□□□ 1.81
IFITM3-202ENST00000526811 KIF13AQ9H1H9 1805 aa26.37■■□□□ 1.81
IFITM3-202ENST00000526811 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
IFITM3-202ENST00000526811 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
IFITM3-202ENST00000526811 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
IFITM3-202ENST00000526811 NUP160Q12769 1436 aa26.33■■□□□ 1.81
IFITM3-202ENST00000526811 KDM4FA0A1W2PPD8 638 aa26.31■■□□□ 1.8
IFITM3-202ENST00000526811 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
IFITM3-202ENST00000526811 FAM69CQ0P6D2 419 aa26.26■■□□□ 1.79
IFITM3-202ENST00000526811 ABCC10Q5T3U5 1492 aa26.21■■□□□ 1.79
IFITM3-202ENST00000526811 ADAMTS12P58397 1594 aa26.2■■□□□ 1.79
IFITM3-202ENST00000526811 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
IFITM3-202ENST00000526811 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
IFITM3-202ENST00000526811 NPM1P06748 294 aaKnown RBP eCLIP26.12■■□□□ 1.77
IFITM3-202ENST00000526811 JPH4Q96JJ6 628 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms