RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 AEBP2Q6ZN18 517 aaPredicted RBP33.61■■■□□ 2.97
FRMD4A-204ENST00000475141 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
FRMD4A-204ENST00000475141 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
FRMD4A-204ENST00000475141 ABCC9O60706 1549 aa29.81■■■□□ 2.36
FRMD4A-204ENST00000475141 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
FRMD4A-204ENST00000475141 SENP3Q9H4L4 574 aaPredicted RBP28.8■■■□□ 2.2
FRMD4A-204ENST00000475141 PHF23Q9BUL5 403 aaPredicted RBP28.43■■■□□ 2.14
FRMD4A-204ENST00000475141 DNAJC5BQ9UF47 199 aa28.19■■■□□ 2.1
FRMD4A-204ENST00000475141 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
FRMD4A-204ENST00000475141 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
FRMD4A-204ENST00000475141 NACADO15069 1562 aa27.92■■■□□ 2.06
FRMD4A-204ENST00000475141 PABPN1Q86U42 306 aaKnown RBP eCLIP27.79■■■□□ 2.04
FRMD4A-204ENST00000475141 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
FRMD4A-204ENST00000475141 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
FRMD4A-204ENST00000475141 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
FRMD4A-204ENST00000475141 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
FRMD4A-204ENST00000475141 BICRAQ9NZM4 1560 aa27.4■■□□□ 1.98
FRMD4A-204ENST00000475141 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
FRMD4A-204ENST00000475141 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
FRMD4A-204ENST00000475141 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
FRMD4A-204ENST00000475141 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
FRMD4A-204ENST00000475141 EIF4G1Q04637 1599 aaKnown RBP26.74■■□□□ 1.87
FRMD4A-204ENST00000475141 FOXD1Q16676 465 aa26.7■■□□□ 1.86
FRMD4A-204ENST00000475141 PLPPR3Q6T4P5 718 aa26.07■■□□□ 1.76
FRMD4A-204ENST00000475141 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
FRMD4A-204ENST00000475141 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
FRMD4A-204ENST00000475141 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
FRMD4A-204ENST00000475141 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
FRMD4A-204ENST00000475141 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
FRMD4A-204ENST00000475141 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
FRMD4A-204ENST00000475141 CUX2O14529 1486 aa25.66■■□□□ 1.7
FRMD4A-204ENST00000475141 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
FRMD4A-204ENST00000475141 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
FRMD4A-204ENST00000475141 NESP48681 1621 aa25.55■■□□□ 1.68
FRMD4A-204ENST00000475141 HMGXB3Q12766 1538 aa25.55■■□□□ 1.68
FRMD4A-204ENST00000475141 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
FRMD4A-204ENST00000475141 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
FRMD4A-204ENST00000475141 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
FRMD4A-204ENST00000475141 WIZO95785 1651 aa25.32■■□□□ 1.64
FRMD4A-204ENST00000475141 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
FRMD4A-204ENST00000475141 LAMC3Q9Y6N6 1575 aa25.24■■□□□ 1.63
FRMD4A-204ENST00000475141 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.62
FRMD4A-204ENST00000475141 ADRA2BP18089 450 aa25.19■■□□□ 1.62
FRMD4A-204ENST00000475141 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
FRMD4A-204ENST00000475141 PIAS4Q8N2W9 510 aaPredicted RBP25.15■■□□□ 1.62
FRMD4A-204ENST00000475141 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
FRMD4A-204ENST00000475141 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
FRMD4A-204ENST00000475141 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
FRMD4A-204ENST00000475141 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
FRMD4A-204ENST00000475141 MSH5O43196 834 aa24.99■■□□□ 1.59
FRMD4A-204ENST00000475141 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
FRMD4A-204ENST00000475141 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
FRMD4A-204ENST00000475141 WDR62O43379 1518 aa24.85■■□□□ 1.57
FRMD4A-204ENST00000475141 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
FRMD4A-204ENST00000475141 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
FRMD4A-204ENST00000475141 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
FRMD4A-204ENST00000475141 CFTRP13569 1480 aa24.68■■□□□ 1.54
FRMD4A-204ENST00000475141 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
FRMD4A-204ENST00000475141 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
FRMD4A-204ENST00000475141 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
FRMD4A-204ENST00000475141 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
FRMD4A-204ENST00000475141 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
FRMD4A-204ENST00000475141 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
FRMD4A-204ENST00000475141 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
FRMD4A-204ENST00000475141 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
FRMD4A-204ENST00000475141 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
FRMD4A-204ENST00000475141 EIF4G3O43432 1585 aaKnown RBP24.15■■□□□ 1.46
FRMD4A-204ENST00000475141 ABCC8Q09428 1581 aa24.14■■□□□ 1.45
FRMD4A-204ENST00000475141 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
FRMD4A-204ENST00000475141 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
FRMD4A-204ENST00000475141 AQRO60306 1485 aaKnown RBP eCLIP24.11■■□□□ 1.45
FRMD4A-204ENST00000475141 FBLN2P98095 1184 aa24.06■■□□□ 1.44
FRMD4A-204ENST00000475141 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
FRMD4A-204ENST00000475141 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
FRMD4A-204ENST00000475141 CHD1O14646 1710 aa24.05■■□□□ 1.44
FRMD4A-204ENST00000475141 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
FRMD4A-204ENST00000475141 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
FRMD4A-204ENST00000475141 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
FRMD4A-204ENST00000475141 CUX1P39880 1505 aa23.97■■□□□ 1.43
FRMD4A-204ENST00000475141 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
FRMD4A-204ENST00000475141 SOGA1O94964 1423 aa23.93■■□□□ 1.42
FRMD4A-204ENST00000475141 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
FRMD4A-204ENST00000475141 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
FRMD4A-204ENST00000475141 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
FRMD4A-204ENST00000475141 TRHP20396 242 aaPredicted RBP23.88■■□□□ 1.41
FRMD4A-204ENST00000475141 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
FRMD4A-204ENST00000475141 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
FRMD4A-204ENST00000475141 SNAPC4Q5SXM2 1469 aa23.82■■□□□ 1.4
FRMD4A-204ENST00000475141 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
FRMD4A-204ENST00000475141 POTEDQ86YR6 584 aa23.74■■□□□ 1.39
FRMD4A-204ENST00000475141 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
FRMD4A-204ENST00000475141 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
FRMD4A-204ENST00000475141 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
FRMD4A-204ENST00000475141 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
FRMD4A-204ENST00000475141 SYNJ2O15056 1496 aa23.63■■□□□ 1.37
FRMD4A-204ENST00000475141 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
FRMD4A-204ENST00000475141 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
FRMD4A-204ENST00000475141 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
FRMD4A-204ENST00000475141 ABCA5Q8WWZ7 1642 aa23.5■■□□□ 1.35
FRMD4A-204ENST00000475141 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 200.6 ms