RNA–Protein interactions for RNA: ENST00000382041.7

NIN-203, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-203ENST00000382041 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
NIN-203ENST00000382041 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
NIN-203ENST00000382041 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
NIN-203ENST00000382041 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
NIN-203ENST00000382041 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
NIN-203ENST00000382041 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
NIN-203ENST00000382041 TTBK1Q5TCY1 1321 aaPredicted RBP24.55■■□□□ 1.52
NIN-203ENST00000382041 APLP2Q06481 763 aa24.48■■□□□ 1.51
NIN-203ENST00000382041 RANGAP1P46060 587 aaPredicted RBP24.32■■□□□ 1.48
NIN-203ENST00000382041 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
NIN-203ENST00000382041 TRIM41Q8WV44 630 aa24.02■■□□□ 1.44
NIN-203ENST00000382041 ATP1B4Q9UN42 357 aaPredicted RBP23.96■■□□□ 1.43
NIN-203ENST00000382041 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
NIN-203ENST00000382041 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
NIN-203ENST00000382041 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
NIN-203ENST00000382041 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
NIN-203ENST00000382041 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
NIN-203ENST00000382041 CENPBP07199 599 aaPredicted RBP23.29■■□□□ 1.32
NIN-203ENST00000382041 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
NIN-203ENST00000382041 ITGAEP38570 1179 aa23.16■■□□□ 1.3
NIN-203ENST00000382041 LOC105371045A0A1W2PR82 267 aa23.16■■□□□ 1.3
NIN-203ENST00000382041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.28
NIN-203ENST00000382041 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.28
NIN-203ENST00000382041 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
NIN-203ENST00000382041 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
NIN-203ENST00000382041 MYT1LQ9UL68 1186 aa22.98■■□□□ 1.27
NIN-203ENST00000382041 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
NIN-203ENST00000382041 NEFLP07196 543 aa22.89■■□□□ 1.25
NIN-203ENST00000382041 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
NIN-203ENST00000382041 PABPN1Q86U42 306 aaKnown RBP eCLIP22.86■■□□□ 1.25
NIN-203ENST00000382041 CNGB1Q14028 1251 aaPredicted RBP22.81■■□□□ 1.24
NIN-203ENST00000382041 ABCC9O60706 1549 aa22.8■■□□□ 1.24
NIN-203ENST00000382041 HRCP23327 699 aa22.7■■□□□ 1.22
NIN-203ENST00000382041 FAM50AQ14320 339 aaKnown RBP22.47■■□□□ 1.19
NIN-203ENST00000382041 SLC4A1APQ9BWU0 796 aaKnown RBP22.43■■□□□ 1.18
NIN-203ENST00000382041 TRIM52Q96A61 297 aa22.31■■□□□ 1.16
NIN-203ENST00000382041 FBLN2P98095 1184 aa22.29■■□□□ 1.16
NIN-203ENST00000382041 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
NIN-203ENST00000382041 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
NIN-203ENST00000382041 DAXXQ9UER7 740 aaPredicted RBP22.18■■□□□ 1.14
NIN-203ENST00000382041 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
NIN-203ENST00000382041 P3H3Q8IVL6 736 aa22.14■■□□□ 1.13
NIN-203ENST00000382041 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
NIN-203ENST00000382041 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
NIN-203ENST00000382041 MYT1Q01538 1121 aa21.91■■□□□ 1.1
NIN-203ENST00000382041 BCANQ96GW7 911 aa21.9■■□□□ 1.1
NIN-203ENST00000382041 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
NIN-203ENST00000382041 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
NIN-203ENST00000382041 SCRIBQ14160 1630 aa21.83■■□□□ 1.09
NIN-203ENST00000382041 ANP32CO43423 234 aa21.78■■□□□ 1.08
NIN-203ENST00000382041 ZNF316A6NFI3 1004 aaPredicted RBP21.72■■□□□ 1.07
NIN-203ENST00000382041 BCL11AQ9H165 835 aa21.7■■□□□ 1.06
NIN-203ENST00000382041 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
NIN-203ENST00000382041 SLC24A1O60721 1099 aa21.66■■□□□ 1.06
NIN-203ENST00000382041 RTL5Q5HYW3 569 aaPredicted RBP21.58■■□□□ 1.05
NIN-203ENST00000382041 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
NIN-203ENST00000382041 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
NIN-203ENST00000382041 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.03
NIN-203ENST00000382041 CANXP27824 592 aaKnown RBP21.5■■□□□ 1.03
NIN-203ENST00000382041 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
NIN-203ENST00000382041 CHIC2Q9UKJ5 165 aa21.46■■□□□ 1.03
NIN-203ENST00000382041 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
NIN-203ENST00000382041 NEFMP07197 916 aa21.37■■□□□ 1.01
NIN-203ENST00000382041 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
NIN-203ENST00000382041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.012e-6■■■□□ 16.6
NIN-203ENST00000382041 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
NIN-203ENST00000382041 STAG3Q9UJ98 1225 aa21.34■■□□□ 1.01
NIN-203ENST00000382041 DDX10Q13206 875 aaKnown RBP21.31■■□□□ 1
NIN-203ENST00000382041 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
NIN-203ENST00000382041 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
NIN-203ENST00000382041 ACIN1Q9UKV3 1341 aaKnown RBP21.27■■□□□ 1
NIN-203ENST00000382041 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
NIN-203ENST00000382041 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
NIN-203ENST00000382041 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
NIN-203ENST00000382041 KDM2AQ9Y2K7 1162 aa21.21■□□□□ 0.99
NIN-203ENST00000382041 NPM2Q86SE8 214 aaKnown RBP21.21■□□□□ 0.99
NIN-203ENST00000382041 HNRNPUQ00839 825 aaKnown RBP eCLIP21.2■□□□□ 0.98
NIN-203ENST00000382041 HIRIP3Q9BW71 556 aaPredicted RBP21.2■□□□□ 0.98
NIN-203ENST00000382041 FKBP8Q14318 412 aa21.17■□□□□ 0.98
NIN-203ENST00000382041 MTUS2Q5JR59 1369 aa21.15■□□□□ 0.98
NIN-203ENST00000382041 DCAF1Q9Y4B6 1507 aa21.13■□□□□ 0.97
NIN-203ENST00000382041 TSPY4P0CV99 314 aa21.12■□□□□ 0.97
NIN-203ENST00000382041 TSPY10P0CW01 314 aa21.12■□□□□ 0.97
NIN-203ENST00000382041 RRP7BPQ9NSQ0 103 aa21.1■□□□□ 0.97
NIN-203ENST00000382041 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
NIN-203ENST00000382041 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
NIN-203ENST00000382041 CLIP1P30622 1438 aa21.09■□□□□ 0.97
NIN-203ENST00000382041 ANP32AP39687 249 aaKnown RBP21.03■□□□□ 0.96
NIN-203ENST00000382041 TMC1Q8TDI8 760 aa21.03■□□□□ 0.96
NIN-203ENST00000382041 MYO15BQ96JP2 1530 aa21.02■□□□□ 0.96
NIN-203ENST00000382041 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
NIN-203ENST00000382041 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
NIN-203ENST00000382041 PLEKHG5O94827 1062 aa20.99■□□□□ 0.95
NIN-203ENST00000382041 MRS2Q9HD23 443 aa20.95■□□□□ 0.94
NIN-203ENST00000382041 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
NIN-203ENST00000382041 SENP3-EIF4A1A0A087X0R7 540 aa20.93■□□□□ 0.94
NIN-203ENST00000382041 IRX6P78412 446 aaPredicted RBP20.92■□□□□ 0.94
NIN-203ENST00000382041 MIER1Q8N108 512 aa20.92■□□□□ 0.94
NIN-203ENST00000382041 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
NIN-203ENST00000382041 WDR43Q15061 677 aaKnown RBP eCLIP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms