Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.18□□□□□ -0.62
TRGV3P03979 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRGV3P03979 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.18□□□□□ -0.62
TRGV3P03979 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 TUBBP5-203ENST00000508529 1334 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
TRGV3P03979 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 RNA5SP359-201ENST00000364838 113 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
TRGV3P03979 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV3P03979 BX284668.4-201ENST00000453917 508 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 RN7SL11P-201ENST00000471305 293 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 ZNF767P-206ENST00000513792 565 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV3P03979 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV3P03979 AC103810.3-201ENST00000583567 96 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.17□□□□□ -0.62
TRGV3P03979 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
TRGV3P03979 MIR6787-201ENST00000616675 61 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 AC090643.2-201ENST00000623442 2029 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV3P03979 CSPG4P11-201ENST00000560634 4910 ntBASIC11.17□□□□□ -0.62
TRGV3P03979 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
TRGV3P03979 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV3P03979 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV3P03979 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV3P03979 AC011474.4-201ENST00000623523 2076 ntBASIC11.16□□□□□ -0.62
TRGV3P03979 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 AC089987.1-201ENST00000551654 2209 ntBASIC11.16□□□□□ -0.62
TRGV3P03979 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV3P03979 FRMPD2B-201ENST00000431305 1347 ntBASIC11.16□□□□□ -0.62
TRGV3P03979 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV3P03979 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TRGV3P03979 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms