RNA–Protein interactions for RNA: ENST00000622328.1

LINC01138-206, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 2 BASIC

Gene LINC01138, Length 2,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-206ENST00000622328 NISCHQ9Y2I1 1504 aa30.45■■■□□ 2.47
LINC01138-206ENST00000622328 CCDC180Q9P1Z9 1646 aa26■■□□□ 1.75
LINC01138-206ENST00000622328 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
LINC01138-206ENST00000622328 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
LINC01138-206ENST00000622328 DCAF1Q9Y4B6 1507 aa25.18■■□□□ 1.62
LINC01138-206ENST00000622328 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
LINC01138-206ENST00000622328 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
LINC01138-206ENST00000622328 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
LINC01138-206ENST00000622328 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
LINC01138-206ENST00000622328 ABCC9O60706 1549 aa24.32■■□□□ 1.48
LINC01138-206ENST00000622328 SCRIBQ14160 1630 aa24.09■■□□□ 1.45
LINC01138-206ENST00000622328 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
LINC01138-206ENST00000622328 NACADO15069 1562 aa24.01■■□□□ 1.43
LINC01138-206ENST00000622328 HRCP23327 699 aa23.96■■□□□ 1.43
LINC01138-206ENST00000622328 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
LINC01138-206ENST00000622328 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
LINC01138-206ENST00000622328 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
LINC01138-206ENST00000622328 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
LINC01138-206ENST00000622328 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
LINC01138-206ENST00000622328 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
LINC01138-206ENST00000622328 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
LINC01138-206ENST00000622328 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
LINC01138-206ENST00000622328 WIZO95785 1651 aa23.41■■□□□ 1.34
LINC01138-206ENST00000622328 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
LINC01138-206ENST00000622328 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
LINC01138-206ENST00000622328 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
LINC01138-206ENST00000622328 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
LINC01138-206ENST00000622328 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
LINC01138-206ENST00000622328 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
LINC01138-206ENST00000622328 UNC13AQ9UPW8 1703 aa23.1■■□□□ 1.29
LINC01138-206ENST00000622328 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
LINC01138-206ENST00000622328 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
LINC01138-206ENST00000622328 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
LINC01138-206ENST00000622328 BICRAQ9NZM4 1560 aa22.85■■□□□ 1.25
LINC01138-206ENST00000622328 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
LINC01138-206ENST00000622328 EEA1Q15075 1411 aa22.83■■□□□ 1.25
LINC01138-206ENST00000622328 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
LINC01138-206ENST00000622328 EHMT2Q96KQ7 1210 aa22.78■■□□□ 1.24
LINC01138-206ENST00000622328 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
LINC01138-206ENST00000622328 SOGA1O94964 1423 aa22.66■■□□□ 1.22
LINC01138-206ENST00000622328 CEP162Q5TB80 1403 aa22.64■■□□□ 1.22
LINC01138-206ENST00000622328 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
LINC01138-206ENST00000622328 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
LINC01138-206ENST00000622328 ATAD2BQ9ULI0 1458 aa22.56■■□□□ 1.2
LINC01138-206ENST00000622328 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
LINC01138-206ENST00000622328 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
LINC01138-206ENST00000622328 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
LINC01138-206ENST00000622328 KIF21BO75037 1637 aa22.45■■□□□ 1.18
LINC01138-206ENST00000622328 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
LINC01138-206ENST00000622328 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
LINC01138-206ENST00000622328 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
LINC01138-206ENST00000622328 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.18
LINC01138-206ENST00000622328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
LINC01138-206ENST00000622328 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
LINC01138-206ENST00000622328 CLIP1P30622 1438 aa22.23■■□□□ 1.15
LINC01138-206ENST00000622328 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
LINC01138-206ENST00000622328 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
LINC01138-206ENST00000622328 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
LINC01138-206ENST00000622328 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
LINC01138-206ENST00000622328 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
LINC01138-206ENST00000622328 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
LINC01138-206ENST00000622328 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
LINC01138-206ENST00000622328 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
LINC01138-206ENST00000622328 APLP2Q06481 763 aa22■■□□□ 1.11
LINC01138-206ENST00000622328 DIEXFQ68CQ4 756 aaKnown RBP22■■□□□ 1.11
LINC01138-206ENST00000622328 CFTRP13569 1480 aa21.99■■□□□ 1.11
LINC01138-206ENST00000622328 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
LINC01138-206ENST00000622328 CUX1P39880 1505 aa21.96■■□□□ 1.11
LINC01138-206ENST00000622328 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
LINC01138-206ENST00000622328 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
LINC01138-206ENST00000622328 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
LINC01138-206ENST00000622328 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
LINC01138-206ENST00000622328 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
LINC01138-206ENST00000622328 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
LINC01138-206ENST00000622328 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
LINC01138-206ENST00000622328 CLSPNQ9HAW4 1339 aa21.81■■□□□ 1.08
LINC01138-206ENST00000622328 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
LINC01138-206ENST00000622328 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
LINC01138-206ENST00000622328 RRBP1Q9P2E9 1410 aaKnown RBP21.72■■□□□ 1.07
LINC01138-206ENST00000622328 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
LINC01138-206ENST00000622328 ARHGAP35Q9NRY4 1499 aa21.7■■□□□ 1.06
LINC01138-206ENST00000622328 RANGAP1P46060 587 aaPredicted RBP21.7■■□□□ 1.06
LINC01138-206ENST00000622328 IGF1RP08069 1367 aa21.65■■□□□ 1.06
LINC01138-206ENST00000622328 CUX2O14529 1486 aa21.65■■□□□ 1.06
LINC01138-206ENST00000622328 KANK4Q5T7N3 995 aaPredicted RBP21.64■■□□□ 1.06
LINC01138-206ENST00000622328 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
LINC01138-206ENST00000622328 DHX57Q6P158 1386 aaKnown RBP21.63■■□□□ 1.05
LINC01138-206ENST00000622328 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
LINC01138-206ENST00000622328 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
LINC01138-206ENST00000622328 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
LINC01138-206ENST00000622328 GTF3C3Q9Y5Q9 886 aa21.52■■□□□ 1.04
LINC01138-206ENST00000622328 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
LINC01138-206ENST00000622328 MIER1Q8N108 512 aa21.47■■□□□ 1.03
LINC01138-206ENST00000622328 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
LINC01138-206ENST00000622328 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
LINC01138-206ENST00000622328 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
LINC01138-206ENST00000622328 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
LINC01138-206ENST00000622328 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
LINC01138-206ENST00000622328 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
LINC01138-206ENST00000622328 CFAP43Q8NDM7 1665 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms