RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
NLRC3-202ENST00000359128 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
NLRC3-202ENST00000359128 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
NLRC3-202ENST00000359128 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.94
NLRC3-202ENST00000359128 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
NLRC3-202ENST00000359128 FAM9AQ8IZU1 332 aaPredicted RBP20.72■□□□□ 0.91
NLRC3-202ENST00000359128 APLP2Q06481 763 aa20.62■□□□□ 0.89
NLRC3-202ENST00000359128 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
NLRC3-202ENST00000359128 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
NLRC3-202ENST00000359128 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
NLRC3-202ENST00000359128 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
NLRC3-202ENST00000359128 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
NLRC3-202ENST00000359128 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
NLRC3-202ENST00000359128 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
NLRC3-202ENST00000359128 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.73
NLRC3-202ENST00000359128 ERICH6Q7L0X2 663 aa19.55■□□□□ 0.72
NLRC3-202ENST00000359128 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
NLRC3-202ENST00000359128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
NLRC3-202ENST00000359128 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
NLRC3-202ENST00000359128 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.68
NLRC3-202ENST00000359128 ZEB1P37275 1124 aaPredicted RBP19.32■□□□□ 0.68
NLRC3-202ENST00000359128 NEFLP07196 543 aa19.22■□□□□ 0.67
NLRC3-202ENST00000359128 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
NLRC3-202ENST00000359128 POLR3GLQ9BT43 218 aa19.12■□□□□ 0.65
NLRC3-202ENST00000359128 ITGAEP38570 1179 aa19.07■□□□□ 0.64
NLRC3-202ENST00000359128 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
NLRC3-202ENST00000359128 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.64
NLRC3-202ENST00000359128 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
NLRC3-202ENST00000359128 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
NLRC3-202ENST00000359128 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
NLRC3-202ENST00000359128 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
NLRC3-202ENST00000359128 ABCC9O60706 1549 aa18.69■□□□□ 0.58
NLRC3-202ENST00000359128 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
NLRC3-202ENST00000359128 FBLN2P98095 1184 aa18.64■□□□□ 0.57
NLRC3-202ENST00000359128 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
NLRC3-202ENST00000359128 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
NLRC3-202ENST00000359128 BCANQ96GW7 911 aa18.52■□□□□ 0.55
NLRC3-202ENST00000359128 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
NLRC3-202ENST00000359128 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
NLRC3-202ENST00000359128 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
NLRC3-202ENST00000359128 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
NLRC3-202ENST00000359128 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
NLRC3-202ENST00000359128 MYT1Q01538 1121 aa18.34■□□□□ 0.53
NLRC3-202ENST00000359128 NEUROD1Q13562 356 aa18.33■□□□□ 0.53
NLRC3-202ENST00000359128 ZBTB47Q9UFB7 747 aaPredicted RBP18.33■□□□□ 0.52
NLRC3-202ENST00000359128 ESF1Q9H501 851 aaKnown RBP18.3■□□□□ 0.52
NLRC3-202ENST00000359128 HRCP23327 699 aa18.27■□□□□ 0.51
NLRC3-202ENST00000359128 NEFMP07197 916 aa18.23■□□□□ 0.51
NLRC3-202ENST00000359128 ARID3CA6NKF2 412 aa18.22■□□□□ 0.51
NLRC3-202ENST00000359128 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
NLRC3-202ENST00000359128 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
NLRC3-202ENST00000359128 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.49
NLRC3-202ENST00000359128 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
NLRC3-202ENST00000359128 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
NLRC3-202ENST00000359128 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
NLRC3-202ENST00000359128 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
NLRC3-202ENST00000359128 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
NLRC3-202ENST00000359128 ANP32CO43423 234 aa18.06■□□□□ 0.48
NLRC3-202ENST00000359128 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
NLRC3-202ENST00000359128 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
NLRC3-202ENST00000359128 CHGAP10645 457 aaKnown RBP18.02■□□□□ 0.47
NLRC3-202ENST00000359128 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
NLRC3-202ENST00000359128 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
NLRC3-202ENST00000359128 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
NLRC3-202ENST00000359128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
NLRC3-202ENST00000359128 A0A0G2JS52 829 aa17.73■□□□□ 0.43
NLRC3-202ENST00000359128 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
NLRC3-202ENST00000359128 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
NLRC3-202ENST00000359128 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
NLRC3-202ENST00000359128 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
NLRC3-202ENST00000359128 TSPY4P0CV99 314 aa17.59■□□□□ 0.41
NLRC3-202ENST00000359128 TSPY10P0CW01 314 aa17.59■□□□□ 0.41
NLRC3-202ENST00000359128 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
NLRC3-202ENST00000359128 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.4
NLRC3-202ENST00000359128 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.4
NLRC3-202ENST00000359128 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
NLRC3-202ENST00000359128 ARID4BQ4LE39 1312 aaPredicted RBP17.56■□□□□ 0.4
NLRC3-202ENST00000359128 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
NLRC3-202ENST00000359128 HAP1P54257 671 aaPredicted RBP17.54■□□□□ 0.4
NLRC3-202ENST00000359128 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
NLRC3-202ENST00000359128 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
NLRC3-202ENST00000359128 KCNH8Q96L42 1107 aa17.5■□□□□ 0.39
NLRC3-202ENST00000359128 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
NLRC3-202ENST00000359128 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
NLRC3-202ENST00000359128 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
NLRC3-202ENST00000359128 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
NLRC3-202ENST00000359128 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
NLRC3-202ENST00000359128 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
NLRC3-202ENST00000359128 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
NLRC3-202ENST00000359128 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
NLRC3-202ENST00000359128 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
NLRC3-202ENST00000359128 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
NLRC3-202ENST00000359128 TMC1Q8TDI8 760 aa17.4■□□□□ 0.38
NLRC3-202ENST00000359128 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
NLRC3-202ENST00000359128 MYH16Q9H6N6 1097 aa17.38■□□□□ 0.37
NLRC3-202ENST00000359128 PLEKHD1A6NEE1 506 aa17.36■□□□□ 0.37
NLRC3-202ENST00000359128 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
NLRC3-202ENST00000359128 ARXQ96QS3 562 aa17.33■□□□□ 0.36
NLRC3-202ENST00000359128 CDK11BP21127 795 aaKnown RBP17.32■□□□□ 0.36
NLRC3-202ENST00000359128 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms