RNA–Protein interactions for RNA: ENST00000341558.3

FOXO4-201, Transcript of forkhead box O4, humanhuman

TSL 5 BASIC

Gene FOXO4, Length 1,353 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO4-201ENST00000341558 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.21
FOXO4-201ENST00000341558 CCDC180Q9P1Z9 1646 aa31.05■■■□□ 2.56
FOXO4-201ENST00000341558 ABCC9O60706 1549 aa30.78■■■□□ 2.52
FOXO4-201ENST00000341558 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
FOXO4-201ENST00000341558 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
FOXO4-201ENST00000341558 NACADO15069 1562 aa29.31■■■□□ 2.28
FOXO4-201ENST00000341558 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
FOXO4-201ENST00000341558 MYO15BQ96JP2 1530 aa29.05■■■□□ 2.24
FOXO4-201ENST00000341558 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
FOXO4-201ENST00000341558 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
FOXO4-201ENST00000341558 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.18
FOXO4-201ENST00000341558 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
FOXO4-201ENST00000341558 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
FOXO4-201ENST00000341558 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
FOXO4-201ENST00000341558 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
FOXO4-201ENST00000341558 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
FOXO4-201ENST00000341558 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
FOXO4-201ENST00000341558 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
FOXO4-201ENST00000341558 SMARCA4P51532 1647 aa27.2■■□□□ 1.94
FOXO4-201ENST00000341558 ATAD2BQ9ULI0 1458 aa27.15■■□□□ 1.94
FOXO4-201ENST00000341558 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.94
FOXO4-201ENST00000341558 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
FOXO4-201ENST00000341558 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
FOXO4-201ENST00000341558 SMARCA2P51531 1590 aa27.02■■□□□ 1.92
FOXO4-201ENST00000341558 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
FOXO4-201ENST00000341558 HMGXB3Q12766 1538 aa26.89■■□□□ 1.9
FOXO4-201ENST00000341558 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
FOXO4-201ENST00000341558 WIZO95785 1651 aa26.75■■□□□ 1.87
FOXO4-201ENST00000341558 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
FOXO4-201ENST00000341558 NESP48681 1621 aa26.61■■□□□ 1.85
FOXO4-201ENST00000341558 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
FOXO4-201ENST00000341558 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
FOXO4-201ENST00000341558 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
FOXO4-201ENST00000341558 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
FOXO4-201ENST00000341558 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
FOXO4-201ENST00000341558 CCDC88BA6NC98 1476 aa26.2■■□□□ 1.79
FOXO4-201ENST00000341558 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
FOXO4-201ENST00000341558 CUX2O14529 1486 aa26.15■■□□□ 1.78
FOXO4-201ENST00000341558 CFTRP13569 1480 aa26.15■■□□□ 1.78
FOXO4-201ENST00000341558 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
FOXO4-201ENST00000341558 THOC2Q8NI27 1593 aaKnown RBP26.08■■□□□ 1.77
FOXO4-201ENST00000341558 FANCD2Q9BXW9 1451 aa26.06■■□□□ 1.76
FOXO4-201ENST00000341558 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
FOXO4-201ENST00000341558 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
FOXO4-201ENST00000341558 WDR62O43379 1518 aa25.87■■□□□ 1.73
FOXO4-201ENST00000341558 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
FOXO4-201ENST00000341558 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
FOXO4-201ENST00000341558 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
FOXO4-201ENST00000341558 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
FOXO4-201ENST00000341558 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
FOXO4-201ENST00000341558 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.68
FOXO4-201ENST00000341558 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
FOXO4-201ENST00000341558 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
FOXO4-201ENST00000341558 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
FOXO4-201ENST00000341558 CUX1P39880 1505 aa25.39■■□□□ 1.66
FOXO4-201ENST00000341558 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
FOXO4-201ENST00000341558 SOGA1O94964 1423 aa25.34■■□□□ 1.65
FOXO4-201ENST00000341558 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
FOXO4-201ENST00000341558 AQRO60306 1485 aaKnown RBP eCLIP25.32■■□□□ 1.64
FOXO4-201ENST00000341558 TARBP1Q13395 1621 aaKnown RBP25.29■■□□□ 1.64
FOXO4-201ENST00000341558 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
FOXO4-201ENST00000341558 EIF4G3O43432 1585 aaKnown RBP25.21■■□□□ 1.63
FOXO4-201ENST00000341558 WRNQ14191 1432 aaPredicted RBP eCLIP25.21■■□□□ 1.63
FOXO4-201ENST00000341558 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
FOXO4-201ENST00000341558 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
FOXO4-201ENST00000341558 FBLN2P98095 1184 aa25.11■■□□□ 1.61
FOXO4-201ENST00000341558 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
FOXO4-201ENST00000341558 ABCA10Q8WWZ4 1543 aa25.04■■□□□ 1.6
FOXO4-201ENST00000341558 BIVM-ERCC5R4GMW8 1640 aa25.03■■□□□ 1.6
FOXO4-201ENST00000341558 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
FOXO4-201ENST00000341558 GRIN2BQ13224 1484 aa25■■□□□ 1.59
FOXO4-201ENST00000341558 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
FOXO4-201ENST00000341558 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
FOXO4-201ENST00000341558 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.59
FOXO4-201ENST00000341558 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
FOXO4-201ENST00000341558 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
FOXO4-201ENST00000341558 CHD1O14646 1710 aa24.89■■□□□ 1.57
FOXO4-201ENST00000341558 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
FOXO4-201ENST00000341558 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
FOXO4-201ENST00000341558 PBRM1Q86U86 1689 aa24.83■■□□□ 1.57
FOXO4-201ENST00000341558 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
FOXO4-201ENST00000341558 RIMBP3CA6NJZ7 1639 aa24.7■■□□□ 1.54
FOXO4-201ENST00000341558 RIMBP3BA6NNM3 1639 aa24.7■■□□□ 1.54
FOXO4-201ENST00000341558 RIMBP3Q9UFD9 1639 aa24.7■■□□□ 1.54
FOXO4-201ENST00000341558 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
FOXO4-201ENST00000341558 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
FOXO4-201ENST00000341558 ADAMTS12P58397 1594 aa24.68■■□□□ 1.54
FOXO4-201ENST00000341558 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
FOXO4-201ENST00000341558 GRIN2AQ12879 1464 aa24.67■■□□□ 1.54
FOXO4-201ENST00000341558 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
FOXO4-201ENST00000341558 IGF1RP08069 1367 aa24.65■■□□□ 1.54
FOXO4-201ENST00000341558 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.53
FOXO4-201ENST00000341558 NUP160Q12769 1436 aa24.57■■□□□ 1.52
FOXO4-201ENST00000341558 CEP170Q5SW79 1584 aa24.55■■□□□ 1.52
FOXO4-201ENST00000341558 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
FOXO4-201ENST00000341558 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
FOXO4-201ENST00000341558 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
FOXO4-201ENST00000341558 JPH4Q96JJ6 628 aa24.42■■□□□ 1.5
FOXO4-201ENST00000341558 ERCC6L2Q5T890 1561 aa24.41■■□□□ 1.5
FOXO4-201ENST00000341558 CUL7Q14999 1698 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms