Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 Z69890.1-201ENST00000382990 339 ntBASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 AC073869.2-201ENST00000417338 1026 ntBASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 FTH1P22-201ENST00000456305 520 ntBASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 NPM1P43-201ENST00000558669 786 ntBASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 AP003419.4-201ENST00000616071 517 ntBASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 AC090386.2-201ENST00000623010 1039 ntBASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 TUBB8P4-201ENST00000511806 1324 ntBASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 RPSAP31-201ENST00000416648 895 ntBASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 MIR6842-201ENST00000612539 65 ntBASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 YRDCP1-201ENST00000621419 643 ntBASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
NPIPA3F8WFD2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
NPIPA3F8WFD2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.9□□□□□ -0.35
NPIPA3F8WFD2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.9□□□□□ -0.35
NPIPA3F8WFD2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NPIPA3F8WFD2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
NPIPA3F8WFD2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms