RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
FAM3B-204ENST00000398652 ABCC9O60706 1549 aa32.89■■■□□ 2.86
FAM3B-204ENST00000398652 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
FAM3B-204ENST00000398652 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
FAM3B-204ENST00000398652 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
FAM3B-204ENST00000398652 AEBP2Q6ZN18 517 aaPredicted RBP30.92■■■□□ 2.54
FAM3B-204ENST00000398652 NACADO15069 1562 aa30.7■■■□□ 2.5
FAM3B-204ENST00000398652 CHIC1Q5VXU3 224 aa30.56■■■□□ 2.48
FAM3B-204ENST00000398652 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
FAM3B-204ENST00000398652 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
FAM3B-204ENST00000398652 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
FAM3B-204ENST00000398652 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
FAM3B-204ENST00000398652 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
FAM3B-204ENST00000398652 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
FAM3B-204ENST00000398652 CC2D2AQ9P2K1 1620 aa29.73■■■□□ 2.35
FAM3B-204ENST00000398652 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
FAM3B-204ENST00000398652 EIF4G1Q04637 1599 aaKnown RBP29.51■■■□□ 2.31
FAM3B-204ENST00000398652 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
FAM3B-204ENST00000398652 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
FAM3B-204ENST00000398652 SCRIBQ14160 1630 aa29.37■■■□□ 2.29
FAM3B-204ENST00000398652 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
FAM3B-204ENST00000398652 CUX2O14529 1486 aa28.67■■■□□ 2.18
FAM3B-204ENST00000398652 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
FAM3B-204ENST00000398652 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
FAM3B-204ENST00000398652 ATAD2BQ9ULI0 1458 aa28.12■■■□□ 2.09
FAM3B-204ENST00000398652 HMGXB3Q12766 1538 aa28.08■■■□□ 2.09
FAM3B-204ENST00000398652 NESP48681 1621 aa28.07■■■□□ 2.08
FAM3B-204ENST00000398652 SMARCA2P51531 1590 aa28.04■■■□□ 2.08
FAM3B-204ENST00000398652 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
FAM3B-204ENST00000398652 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
FAM3B-204ENST00000398652 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
FAM3B-204ENST00000398652 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
FAM3B-204ENST00000398652 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
FAM3B-204ENST00000398652 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
FAM3B-204ENST00000398652 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
FAM3B-204ENST00000398652 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
FAM3B-204ENST00000398652 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
FAM3B-204ENST00000398652 MRC2Q9UBG0 1479 aa27.45■■□□□ 1.99
FAM3B-204ENST00000398652 WDR62O43379 1518 aa27.44■■□□□ 1.98
FAM3B-204ENST00000398652 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
FAM3B-204ENST00000398652 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
FAM3B-204ENST00000398652 CEP164Q9UPV0 1460 aa27.21■■□□□ 1.95
FAM3B-204ENST00000398652 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
FAM3B-204ENST00000398652 WIZO95785 1651 aa27.11■■□□□ 1.93
FAM3B-204ENST00000398652 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
FAM3B-204ENST00000398652 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
FAM3B-204ENST00000398652 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
FAM3B-204ENST00000398652 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
FAM3B-204ENST00000398652 CFTRP13569 1480 aa26.96■■□□□ 1.91
FAM3B-204ENST00000398652 PHF23Q9BUL5 403 aaPredicted RBP26.94■■□□□ 1.9
FAM3B-204ENST00000398652 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
FAM3B-204ENST00000398652 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
FAM3B-204ENST00000398652 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
FAM3B-204ENST00000398652 TOP2AP11388 1531 aaKnown RBP26.72■■□□□ 1.87
FAM3B-204ENST00000398652 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.86
FAM3B-204ENST00000398652 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
FAM3B-204ENST00000398652 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
FAM3B-204ENST00000398652 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
FAM3B-204ENST00000398652 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
FAM3B-204ENST00000398652 CHD1O14646 1710 aa26.54■■□□□ 1.84
FAM3B-204ENST00000398652 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
FAM3B-204ENST00000398652 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
FAM3B-204ENST00000398652 TRHP20396 242 aaPredicted RBP26.48■■□□□ 1.83
FAM3B-204ENST00000398652 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
FAM3B-204ENST00000398652 DNMBPQ6XZF7 1577 aa26.4■■□□□ 1.82
FAM3B-204ENST00000398652 TARBP1Q13395 1621 aaKnown RBP26.38■■□□□ 1.81
FAM3B-204ENST00000398652 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
FAM3B-204ENST00000398652 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.81
FAM3B-204ENST00000398652 FBLN2P98095 1184 aa26.25■■□□□ 1.79
FAM3B-204ENST00000398652 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
FAM3B-204ENST00000398652 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
FAM3B-204ENST00000398652 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
FAM3B-204ENST00000398652 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
FAM3B-204ENST00000398652 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
FAM3B-204ENST00000398652 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
FAM3B-204ENST00000398652 RAD54L2Q9Y4B4 1467 aa26.09■■□□□ 1.77
FAM3B-204ENST00000398652 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
FAM3B-204ENST00000398652 SOGA1O94964 1423 aa26.04■■□□□ 1.76
FAM3B-204ENST00000398652 MAGI1Q96QZ7 1491 aaPredicted RBP26.01■■□□□ 1.75
FAM3B-204ENST00000398652 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
FAM3B-204ENST00000398652 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.74
FAM3B-204ENST00000398652 SYNJ2O15056 1496 aa25.93■■□□□ 1.74
FAM3B-204ENST00000398652 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
FAM3B-204ENST00000398652 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
FAM3B-204ENST00000398652 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
FAM3B-204ENST00000398652 CUX1P39880 1505 aa25.82■■□□□ 1.72
FAM3B-204ENST00000398652 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
FAM3B-204ENST00000398652 ERCC6L2Q5T890 1561 aa25.69■■□□□ 1.7
FAM3B-204ENST00000398652 KIF13AQ9H1H9 1805 aa25.63■■□□□ 1.69
FAM3B-204ENST00000398652 ABCA10Q8WWZ4 1543 aa25.62■■□□□ 1.69
FAM3B-204ENST00000398652 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
FAM3B-204ENST00000398652 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
FAM3B-204ENST00000398652 SHROOM2Q13796 1616 aa25.56■■□□□ 1.68
FAM3B-204ENST00000398652 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
FAM3B-204ENST00000398652 NUP160Q12769 1436 aa25.54■■□□□ 1.68
FAM3B-204ENST00000398652 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
FAM3B-204ENST00000398652 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
FAM3B-204ENST00000398652 ABCC10Q5T3U5 1492 aa25.32■■□□□ 1.64
FAM3B-204ENST00000398652 PRG4Q92954 1404 aaPredicted RBP25.31■■□□□ 1.64
FAM3B-204ENST00000398652 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms