RNA–Protein interactions for RNA: ENST00000346042.7

PDE8B-205, Transcript of phosphodiesterase 8B, humanhuman

TSL 1 (best) BASIC

Gene PDE8B, Length 3,276 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-205ENST00000346042 NISCHQ9Y2I1 1504 aa32.56■■■□□ 2.8
PDE8B-205ENST00000346042 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.11
PDE8B-205ENST00000346042 CCDC180Q9P1Z9 1646 aa28.19■■■□□ 2.1
PDE8B-205ENST00000346042 ABCC9O60706 1549 aa28.04■■■□□ 2.08
PDE8B-205ENST00000346042 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
PDE8B-205ENST00000346042 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
PDE8B-205ENST00000346042 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.86
PDE8B-205ENST00000346042 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
PDE8B-205ENST00000346042 NACADO15069 1562 aa26.58■■□□□ 1.85
PDE8B-205ENST00000346042 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
PDE8B-205ENST00000346042 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
PDE8B-205ENST00000346042 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
PDE8B-205ENST00000346042 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
PDE8B-205ENST00000346042 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.73
PDE8B-205ENST00000346042 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
PDE8B-205ENST00000346042 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
PDE8B-205ENST00000346042 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
PDE8B-205ENST00000346042 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
PDE8B-205ENST00000346042 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
PDE8B-205ENST00000346042 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
PDE8B-205ENST00000346042 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
PDE8B-205ENST00000346042 SMARCA4P51532 1647 aa25.09■■□□□ 1.61
PDE8B-205ENST00000346042 WIZO95785 1651 aa25.07■■□□□ 1.6
PDE8B-205ENST00000346042 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
PDE8B-205ENST00000346042 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
PDE8B-205ENST00000346042 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
PDE8B-205ENST00000346042 SMARCA2P51531 1590 aa24.72■■□□□ 1.55
PDE8B-205ENST00000346042 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
PDE8B-205ENST00000346042 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
PDE8B-205ENST00000346042 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
PDE8B-205ENST00000346042 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
PDE8B-205ENST00000346042 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
PDE8B-205ENST00000346042 NESP48681 1621 aa24.42■■□□□ 1.5
PDE8B-205ENST00000346042 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
PDE8B-205ENST00000346042 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
PDE8B-205ENST00000346042 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
PDE8B-205ENST00000346042 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
PDE8B-205ENST00000346042 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.44
PDE8B-205ENST00000346042 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
PDE8B-205ENST00000346042 CFTRP13569 1480 aa24.04■■□□□ 1.44
PDE8B-205ENST00000346042 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
PDE8B-205ENST00000346042 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
PDE8B-205ENST00000346042 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
PDE8B-205ENST00000346042 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
PDE8B-205ENST00000346042 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
PDE8B-205ENST00000346042 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
PDE8B-205ENST00000346042 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
PDE8B-205ENST00000346042 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
PDE8B-205ENST00000346042 CUX1P39880 1505 aa23.65■■□□□ 1.38
PDE8B-205ENST00000346042 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
PDE8B-205ENST00000346042 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
PDE8B-205ENST00000346042 TOPBP1Q92547 1522 aa23.58■■□□□ 1.36
PDE8B-205ENST00000346042 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
PDE8B-205ENST00000346042 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
PDE8B-205ENST00000346042 SOGA1O94964 1423 aa23.55■■□□□ 1.36
PDE8B-205ENST00000346042 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
PDE8B-205ENST00000346042 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
PDE8B-205ENST00000346042 LOC105371045A0A1W2PR82 267 aa23.53■■□□□ 1.36
PDE8B-205ENST00000346042 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
PDE8B-205ENST00000346042 FBLN2P98095 1184 aa23.48■■□□□ 1.35
PDE8B-205ENST00000346042 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
PDE8B-205ENST00000346042 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
PDE8B-205ENST00000346042 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.34
PDE8B-205ENST00000346042 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
PDE8B-205ENST00000346042 CUX2O14529 1486 aa23.41■■□□□ 1.34
PDE8B-205ENST00000346042 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
PDE8B-205ENST00000346042 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
PDE8B-205ENST00000346042 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
PDE8B-205ENST00000346042 WDR62O43379 1518 aa23.31■■□□□ 1.32
PDE8B-205ENST00000346042 CSRNP3Q8WYN3 585 aa23.31■■□□□ 1.32
PDE8B-205ENST00000346042 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
PDE8B-205ENST00000346042 BIVM-ERCC5R4GMW8 1640 aa23.24■■□□□ 1.31
PDE8B-205ENST00000346042 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
PDE8B-205ENST00000346042 TTBK1Q5TCY1 1321 aaPredicted RBP23.19■■□□□ 1.3
PDE8B-205ENST00000346042 IFT140Q96RY7 1462 aa23.16■■□□□ 1.3
PDE8B-205ENST00000346042 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
PDE8B-205ENST00000346042 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
PDE8B-205ENST00000346042 IGF1RP08069 1367 aa23.13■■□□□ 1.29
PDE8B-205ENST00000346042 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
PDE8B-205ENST00000346042 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
PDE8B-205ENST00000346042 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
PDE8B-205ENST00000346042 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
PDE8B-205ENST00000346042 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
PDE8B-205ENST00000346042 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
PDE8B-205ENST00000346042 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
PDE8B-205ENST00000346042 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
PDE8B-205ENST00000346042 EEA1Q15075 1411 aa22.87■■□□□ 1.25
PDE8B-205ENST00000346042 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
PDE8B-205ENST00000346042 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
PDE8B-205ENST00000346042 ATP1B4Q9UN42 357 aaPredicted RBP22.84■■□□□ 1.25
PDE8B-205ENST00000346042 ARID3CA6NKF2 412 aa22.82■■□□□ 1.24
PDE8B-205ENST00000346042 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
PDE8B-205ENST00000346042 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
PDE8B-205ENST00000346042 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
PDE8B-205ENST00000346042 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
PDE8B-205ENST00000346042 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
PDE8B-205ENST00000346042 ERICH3Q5RHP9 1530 aa22.75■■□□□ 1.23
PDE8B-205ENST00000346042 OSCARQ8IYS5 282 aa22.75■■□□□ 1.23
PDE8B-205ENST00000346042 SYNJ2O15056 1496 aa22.72■■□□□ 1.23
PDE8B-205ENST00000346042 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms