RNA–Protein interactions for RNA: ENST00000395154.7

STX1A-202, Transcript of syntaxin 1A, humanhuman

TSL 3 BASIC

Gene STX1A, Length 1,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-202ENST00000395154 NISCHQ9Y2I1 1504 aa35.26■■■■□ 3.23
STX1A-202ENST00000395154 ABCC9O60706 1549 aa32.39■■■□□ 2.78
STX1A-202ENST00000395154 CCDC180Q9P1Z9 1646 aa31.9■■■□□ 2.7
STX1A-202ENST00000395154 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
STX1A-202ENST00000395154 RB1CC1Q8TDY2 1594 aa30.66■■■□□ 2.5
STX1A-202ENST00000395154 NACADO15069 1562 aa30.32■■■□□ 2.44
STX1A-202ENST00000395154 PABPN1Q86U42 306 aaKnown RBP eCLIP30.04■■■□□ 2.4
STX1A-202ENST00000395154 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
STX1A-202ENST00000395154 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.36
STX1A-202ENST00000395154 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
STX1A-202ENST00000395154 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
STX1A-202ENST00000395154 SHROOM4Q9ULL8 1493 aa29.43■■■□□ 2.3
STX1A-202ENST00000395154 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
STX1A-202ENST00000395154 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
STX1A-202ENST00000395154 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
STX1A-202ENST00000395154 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
STX1A-202ENST00000395154 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
STX1A-202ENST00000395154 SCRIBQ14160 1630 aa28.97■■■□□ 2.23
STX1A-202ENST00000395154 DNAJC5Q9H3Z4 198 aa28.81■■■□□ 2.2
STX1A-202ENST00000395154 CUX2O14529 1486 aa28.25■■■□□ 2.11
STX1A-202ENST00000395154 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
STX1A-202ENST00000395154 NCAPD3P42695 1498 aa28■■■□□ 2.07
STX1A-202ENST00000395154 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
STX1A-202ENST00000395154 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
STX1A-202ENST00000395154 SMARCA2P51531 1590 aa27.74■■■□□ 2.03
STX1A-202ENST00000395154 NESP48681 1621 aa27.63■■■□□ 2.01
STX1A-202ENST00000395154 SMARCA4P51532 1647 aa27.6■■■□□ 2.01
STX1A-202ENST00000395154 BAZ1BQ9UIG0 1483 aaKnown RBP27.53■■■□□ 2
STX1A-202ENST00000395154 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
STX1A-202ENST00000395154 BAZ1AQ9NRL2 1556 aaPredicted RBP27.45■■□□□ 1.99
STX1A-202ENST00000395154 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
STX1A-202ENST00000395154 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.97
STX1A-202ENST00000395154 PDS5BQ9NTI5 1447 aa27.35■■□□□ 1.97
STX1A-202ENST00000395154 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
STX1A-202ENST00000395154 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
STX1A-202ENST00000395154 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
STX1A-202ENST00000395154 MROH2BQ7Z745 1585 aa27.11■■□□□ 1.93
STX1A-202ENST00000395154 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
STX1A-202ENST00000395154 WDR62O43379 1518 aa27.05■■□□□ 1.92
STX1A-202ENST00000395154 CEP164Q9UPV0 1460 aa26.89■■□□□ 1.9
STX1A-202ENST00000395154 OSCARQ8IYS5 282 aa26.84■■□□□ 1.89
STX1A-202ENST00000395154 FANCD2Q9BXW9 1451 aa26.79■■□□□ 1.88
STX1A-202ENST00000395154 WIZO95785 1651 aa26.72■■□□□ 1.87
STX1A-202ENST00000395154 CFTRP13569 1480 aa26.68■■□□□ 1.86
STX1A-202ENST00000395154 URB2Q14146 1524 aaKnown RBP26.57■■□□□ 1.84
STX1A-202ENST00000395154 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
STX1A-202ENST00000395154 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
STX1A-202ENST00000395154 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
STX1A-202ENST00000395154 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
STX1A-202ENST00000395154 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
STX1A-202ENST00000395154 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
STX1A-202ENST00000395154 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
STX1A-202ENST00000395154 ZNF608Q9ULD9 1512 aaPredicted RBP26.31■■□□□ 1.8
STX1A-202ENST00000395154 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
STX1A-202ENST00000395154 TOPBP1Q92547 1522 aa26.2■■□□□ 1.79
STX1A-202ENST00000395154 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
STX1A-202ENST00000395154 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
STX1A-202ENST00000395154 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
STX1A-202ENST00000395154 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
STX1A-202ENST00000395154 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
STX1A-202ENST00000395154 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.77
STX1A-202ENST00000395154 ARAP1Q96P48 1450 aa26.05■■□□□ 1.76
STX1A-202ENST00000395154 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.762e-6■■■■■ 26.9
STX1A-202ENST00000395154 CHD1O14646 1710 aa26■■□□□ 1.75
STX1A-202ENST00000395154 FBLN2P98095 1184 aa25.99■■□□□ 1.75
STX1A-202ENST00000395154 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
STX1A-202ENST00000395154 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
STX1A-202ENST00000395154 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
STX1A-202ENST00000395154 SOGA1O94964 1423 aa25.8■■□□□ 1.72
STX1A-202ENST00000395154 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
STX1A-202ENST00000395154 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
STX1A-202ENST00000395154 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
STX1A-202ENST00000395154 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
STX1A-202ENST00000395154 SNAPC4Q5SXM2 1469 aa25.76■■□□□ 1.71
STX1A-202ENST00000395154 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
STX1A-202ENST00000395154 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
STX1A-202ENST00000395154 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
STX1A-202ENST00000395154 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
STX1A-202ENST00000395154 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
STX1A-202ENST00000395154 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
STX1A-202ENST00000395154 GAPVD1Q14C86 1478 aa25.57■■□□□ 1.68
STX1A-202ENST00000395154 CUX1P39880 1505 aa25.52■■□□□ 1.68
STX1A-202ENST00000395154 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
STX1A-202ENST00000395154 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
STX1A-202ENST00000395154 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
STX1A-202ENST00000395154 GRIN2AQ12879 1464 aa25.31■■□□□ 1.64
STX1A-202ENST00000395154 NUP160Q12769 1436 aa25.25■■□□□ 1.63
STX1A-202ENST00000395154 ERCC6L2Q5T890 1561 aa25.25■■□□□ 1.63
STX1A-202ENST00000395154 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
STX1A-202ENST00000395154 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
STX1A-202ENST00000395154 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
STX1A-202ENST00000395154 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
STX1A-202ENST00000395154 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
STX1A-202ENST00000395154 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
STX1A-202ENST00000395154 PRG4Q92954 1404 aaPredicted RBP25.05■■□□□ 1.6
STX1A-202ENST00000395154 KIF13AQ9H1H9 1805 aa25.04■■□□□ 1.6
STX1A-202ENST00000395154 NPM1P06748 294 aaKnown RBP eCLIP24.99■■□□□ 1.59
STX1A-202ENST00000395154 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
STX1A-202ENST00000395154 ABCC10Q5T3U5 1492 aa24.99■■□□□ 1.59
STX1A-202ENST00000395154 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms