RNA–Protein interactions for RNA: ENST00000616071.1

AP003419.4-201, humanhuman

BASIC

Gene AP003419.4, Length 517 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003419.4-201ENST00000616071 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
AP003419.4-201ENST00000616071 ABCC9O60706 1549 aa32.62■■■□□ 2.81
AP003419.4-201ENST00000616071 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
AP003419.4-201ENST00000616071 DNAJC5BQ9UF47 199 aa31■■■□□ 2.55
AP003419.4-201ENST00000616071 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
AP003419.4-201ENST00000616071 NACADO15069 1562 aa30.49■■■□□ 2.47
AP003419.4-201ENST00000616071 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
AP003419.4-201ENST00000616071 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
AP003419.4-201ENST00000616071 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
AP003419.4-201ENST00000616071 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
AP003419.4-201ENST00000616071 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
AP003419.4-201ENST00000616071 SHROOM4Q9ULL8 1493 aa29.48■■■□□ 2.31
AP003419.4-201ENST00000616071 CC2D2AQ9P2K1 1620 aa29.48■■■□□ 2.31
AP003419.4-201ENST00000616071 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
AP003419.4-201ENST00000616071 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
AP003419.4-201ENST00000616071 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
AP003419.4-201ENST00000616071 SCRIBQ14160 1630 aa29.33■■■□□ 2.29
AP003419.4-201ENST00000616071 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
AP003419.4-201ENST00000616071 DNAJC5Q9H3Z4 198 aa28.74■■■□□ 2.19
AP003419.4-201ENST00000616071 CUX2O14529 1486 aa28.27■■■□□ 2.12
AP003419.4-201ENST00000616071 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
AP003419.4-201ENST00000616071 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
AP003419.4-201ENST00000616071 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
AP003419.4-201ENST00000616071 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
AP003419.4-201ENST00000616071 NESP48681 1621 aa27.92■■■□□ 2.06
AP003419.4-201ENST00000616071 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
AP003419.4-201ENST00000616071 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
AP003419.4-201ENST00000616071 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
AP003419.4-201ENST00000616071 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
AP003419.4-201ENST00000616071 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
AP003419.4-201ENST00000616071 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.01
AP003419.4-201ENST00000616071 LAMC3Q9Y6N6 1575 aa27.62■■■□□ 2.01
AP003419.4-201ENST00000616071 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
AP003419.4-201ENST00000616071 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
AP003419.4-201ENST00000616071 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
AP003419.4-201ENST00000616071 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
AP003419.4-201ENST00000616071 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
AP003419.4-201ENST00000616071 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
AP003419.4-201ENST00000616071 WDR62O43379 1518 aa27.24■■□□□ 1.95
AP003419.4-201ENST00000616071 WIZO95785 1651 aa27.14■■□□□ 1.94
AP003419.4-201ENST00000616071 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
AP003419.4-201ENST00000616071 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
AP003419.4-201ENST00000616071 CFTRP13569 1480 aa26.87■■□□□ 1.89
AP003419.4-201ENST00000616071 URB2Q14146 1524 aaKnown RBP26.83■■□□□ 1.89
AP003419.4-201ENST00000616071 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
AP003419.4-201ENST00000616071 TOP2AP11388 1531 aaKnown RBP26.74■■□□□ 1.87
AP003419.4-201ENST00000616071 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
AP003419.4-201ENST00000616071 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
AP003419.4-201ENST00000616071 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
AP003419.4-201ENST00000616071 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
AP003419.4-201ENST00000616071 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
AP003419.4-201ENST00000616071 ZNF608Q9ULD9 1512 aaPredicted RBP26.58■■□□□ 1.85
AP003419.4-201ENST00000616071 ARHGEF11O15085 1522 aa26.52■■□□□ 1.84
AP003419.4-201ENST00000616071 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
AP003419.4-201ENST00000616071 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
AP003419.4-201ENST00000616071 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
AP003419.4-201ENST00000616071 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
AP003419.4-201ENST00000616071 CHD1O14646 1710 aa26.35■■□□□ 1.81
AP003419.4-201ENST00000616071 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
AP003419.4-201ENST00000616071 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
AP003419.4-201ENST00000616071 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
AP003419.4-201ENST00000616071 CYB5RLQ6IPT4 315 aa26.25■■□□□ 1.79
AP003419.4-201ENST00000616071 ARAP1Q96P48 1450 aa26.24■■□□□ 1.79
AP003419.4-201ENST00000616071 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.79
AP003419.4-201ENST00000616071 POLA1P09884 1462 aaPredicted RBP26.14■■□□□ 1.78
AP003419.4-201ENST00000616071 TRHP20396 242 aaPredicted RBP26.09■■□□□ 1.77
AP003419.4-201ENST00000616071 FBLN2P98095 1184 aa26.07■■□□□ 1.76
AP003419.4-201ENST00000616071 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
AP003419.4-201ENST00000616071 CLASP1Q7Z460 1538 aa26■■□□□ 1.75
AP003419.4-201ENST00000616071 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
AP003419.4-201ENST00000616071 TDRD9Q8NDG6 1382 aaKnown RBP25.98■■□□□ 1.75
AP003419.4-201ENST00000616071 SOGA1O94964 1423 aa25.95■■□□□ 1.74
AP003419.4-201ENST00000616071 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
AP003419.4-201ENST00000616071 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
AP003419.4-201ENST00000616071 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
AP003419.4-201ENST00000616071 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
AP003419.4-201ENST00000616071 CUX1P39880 1505 aa25.84■■□□□ 1.73
AP003419.4-201ENST00000616071 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
AP003419.4-201ENST00000616071 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
AP003419.4-201ENST00000616071 SYNJ2O15056 1496 aa25.79■■□□□ 1.72
AP003419.4-201ENST00000616071 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
AP003419.4-201ENST00000616071 GAPVD1Q14C86 1478 aa25.69■■□□□ 1.7
AP003419.4-201ENST00000616071 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
AP003419.4-201ENST00000616071 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
AP003419.4-201ENST00000616071 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
AP003419.4-201ENST00000616071 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.68
AP003419.4-201ENST00000616071 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
AP003419.4-201ENST00000616071 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
AP003419.4-201ENST00000616071 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
AP003419.4-201ENST00000616071 NUP160Q12769 1436 aa25.44■■□□□ 1.66
AP003419.4-201ENST00000616071 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
AP003419.4-201ENST00000616071 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
AP003419.4-201ENST00000616071 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
AP003419.4-201ENST00000616071 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
AP003419.4-201ENST00000616071 FHAD1B1AJZ9 1412 aa25.29■■□□□ 1.64
AP003419.4-201ENST00000616071 TOP2BQ02880 1626 aa25.29■■□□□ 1.64
AP003419.4-201ENST00000616071 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
AP003419.4-201ENST00000616071 PRG4Q92954 1404 aaPredicted RBP25.19■■□□□ 1.62
AP003419.4-201ENST00000616071 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
AP003419.4-201ENST00000616071 ABCC10Q5T3U5 1492 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms