Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.97■□□□□ 0.31
EYA3Q99504 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.97■□□□□ 0.31
EYA3Q99504 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.97■□□□□ 0.31
EYA3Q99504 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.97■□□□□ 0.31
EYA3Q99504 TBC1D3P6-201ENST00000505954 962 ntBASIC16.97■□□□□ 0.31
EYA3Q99504 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.97■□□□□ 0.31
EYA3Q99504 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
EYA3Q99504 MIR8071-1-201ENST00000616769 65 ntBASIC16.97■□□□□ 0.31
EYA3Q99504 MIR8071-2-201ENST00000616772 65 ntBASIC16.97■□□□□ 0.31
EYA3Q99504 AC126755.5-201ENST00000622756 267 ntBASIC16.97■□□□□ 0.31
EYA3Q99504 AC148477.9-201ENST00000623974 539 ntBASIC16.97■□□□□ 0.31
EYA3Q99504 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.97■□□□□ 0.31
EYA3Q99504 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
EYA3Q99504 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 AC097359.2-201ENST00000604992 2389 ntBASIC16.97■□□□□ 0.31
EYA3Q99504 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.97■□□□□ 0.31
EYA3Q99504 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EYA3Q99504 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
EYA3Q99504 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.97■□□□□ 0.31
EYA3Q99504 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
EYA3Q99504 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
EYA3Q99504 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EYA3Q99504 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EYA3Q99504 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.97■□□□□ 0.31
EYA3Q99504 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
EYA3Q99504 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.96■□□□□ 0.31
EYA3Q99504 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
EYA3Q99504 SIRPB3P-201ENST00000340424 1216 ntBASIC16.96■□□□□ 0.31
EYA3Q99504 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC16.96■□□□□ 0.31
EYA3Q99504 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.96■□□□□ 0.31
EYA3Q99504 AC078814.4-201ENST00000546650 327 ntBASIC16.96■□□□□ 0.31
EYA3Q99504 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 MME-218ENST00000625667 363 ntTSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 AC139713.2-207ENST00000641556 1292 ntBASIC16.96■□□□□ 0.31
EYA3Q99504 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.96■□□□□ 0.31
EYA3Q99504 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
EYA3Q99504 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
EYA3Q99504 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EYA3Q99504 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EYA3Q99504 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
EYA3Q99504 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
EYA3Q99504 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
EYA3Q99504 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
EYA3Q99504 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
EYA3Q99504 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EYA3Q99504 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
EYA3Q99504 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EYA3Q99504 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EYA3Q99504 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
EYA3Q99504 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.95■□□□□ 0.3
EYA3Q99504 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EYA3Q99504 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.95■□□□□ 0.3
EYA3Q99504 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.95■□□□□ 0.3
EYA3Q99504 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EYA3Q99504 AL161772.1-201ENST00000610494 4412 ntBASIC16.95■□□□□ 0.3
EYA3Q99504 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EYA3Q99504 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EYA3Q99504 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms