RNA–Protein interactions for RNA: ENST00000381589.7

TNNT3-207, Transcript of troponin T3, fast skeletal type, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNNT3, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3-207ENST00000381589 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
TNNT3-207ENST00000381589 ABCC9O60706 1549 aa30.19■■■□□ 2.42
TNNT3-207ENST00000381589 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
TNNT3-207ENST00000381589 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
TNNT3-207ENST00000381589 RB1CC1Q8TDY2 1594 aa28.41■■■□□ 2.14
TNNT3-207ENST00000381589 NACADO15069 1562 aa28.03■■■□□ 2.08
TNNT3-207ENST00000381589 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
TNNT3-207ENST00000381589 DCAF8L2P0C7V8 631 aa27.76■■■□□ 2.03
TNNT3-207ENST00000381589 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
TNNT3-207ENST00000381589 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
TNNT3-207ENST00000381589 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
TNNT3-207ENST00000381589 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
TNNT3-207ENST00000381589 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
TNNT3-207ENST00000381589 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
TNNT3-207ENST00000381589 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
TNNT3-207ENST00000381589 DCAF1Q9Y4B6 1507 aa27.23■■□□□ 1.95
TNNT3-207ENST00000381589 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.95
TNNT3-207ENST00000381589 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
TNNT3-207ENST00000381589 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
TNNT3-207ENST00000381589 CUX2O14529 1486 aa26.46■■□□□ 1.83
TNNT3-207ENST00000381589 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
TNNT3-207ENST00000381589 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
TNNT3-207ENST00000381589 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
TNNT3-207ENST00000381589 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
TNNT3-207ENST00000381589 NESP48681 1621 aa25.64■■□□□ 1.7
TNNT3-207ENST00000381589 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
TNNT3-207ENST00000381589 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
TNNT3-207ENST00000381589 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
TNNT3-207ENST00000381589 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
TNNT3-207ENST00000381589 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
TNNT3-207ENST00000381589 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
TNNT3-207ENST00000381589 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
TNNT3-207ENST00000381589 PDS5BQ9NTI5 1447 aa25.39■■□□□ 1.66
TNNT3-207ENST00000381589 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
TNNT3-207ENST00000381589 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
TNNT3-207ENST00000381589 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
TNNT3-207ENST00000381589 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
TNNT3-207ENST00000381589 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
TNNT3-207ENST00000381589 CADPSQ9ULU8 1353 aa25.08■■□□□ 1.61
TNNT3-207ENST00000381589 WDR62O43379 1518 aa25.07■■□□□ 1.6
TNNT3-207ENST00000381589 WIZO95785 1651 aa25■■□□□ 1.59
TNNT3-207ENST00000381589 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
TNNT3-207ENST00000381589 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.57
TNNT3-207ENST00000381589 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
TNNT3-207ENST00000381589 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
TNNT3-207ENST00000381589 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
TNNT3-207ENST00000381589 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
TNNT3-207ENST00000381589 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
TNNT3-207ENST00000381589 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
TNNT3-207ENST00000381589 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
TNNT3-207ENST00000381589 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
TNNT3-207ENST00000381589 CYB5RLQ6IPT4 315 aa24.59■■□□□ 1.53
TNNT3-207ENST00000381589 CFTRP13569 1480 aa24.58■■□□□ 1.53
TNNT3-207ENST00000381589 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
TNNT3-207ENST00000381589 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
TNNT3-207ENST00000381589 IFT140Q96RY7 1462 aa24.45■■□□□ 1.5
TNNT3-207ENST00000381589 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
TNNT3-207ENST00000381589 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
TNNT3-207ENST00000381589 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
TNNT3-207ENST00000381589 FBLN2P98095 1184 aa24.21■■□□□ 1.47
TNNT3-207ENST00000381589 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
TNNT3-207ENST00000381589 ABCC8Q09428 1581 aa24.18■■□□□ 1.46
TNNT3-207ENST00000381589 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
TNNT3-207ENST00000381589 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.45
TNNT3-207ENST00000381589 CHD1O14646 1710 aa24.12■■□□□ 1.45
TNNT3-207ENST00000381589 AQRO60306 1485 aaKnown RBP eCLIP24.1■■□□□ 1.45
TNNT3-207ENST00000381589 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
TNNT3-207ENST00000381589 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
TNNT3-207ENST00000381589 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
TNNT3-207ENST00000381589 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
TNNT3-207ENST00000381589 SYNJ1O43426 1573 aa23.88■■□□□ 1.41
TNNT3-207ENST00000381589 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
TNNT3-207ENST00000381589 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
TNNT3-207ENST00000381589 SNAPC4Q5SXM2 1469 aa23.82■■□□□ 1.4
TNNT3-207ENST00000381589 SOGA1O94964 1423 aa23.81■■□□□ 1.4
TNNT3-207ENST00000381589 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
TNNT3-207ENST00000381589 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
TNNT3-207ENST00000381589 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
TNNT3-207ENST00000381589 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
TNNT3-207ENST00000381589 CUX1P39880 1505 aa23.77■■□□□ 1.4
TNNT3-207ENST00000381589 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
TNNT3-207ENST00000381589 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
TNNT3-207ENST00000381589 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
TNNT3-207ENST00000381589 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
TNNT3-207ENST00000381589 ILDR1Q86SU0 546 aaPredicted RBP23.53■■□□□ 1.36
TNNT3-207ENST00000381589 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
TNNT3-207ENST00000381589 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
TNNT3-207ENST00000381589 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
TNNT3-207ENST00000381589 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
TNNT3-207ENST00000381589 ERCC6L2Q5T890 1561 aa23.39■■□□□ 1.33
TNNT3-207ENST00000381589 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
TNNT3-207ENST00000381589 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
TNNT3-207ENST00000381589 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
TNNT3-207ENST00000381589 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.33
TNNT3-207ENST00000381589 KDM4FA0A1W2PPD8 638 aa23.33■■□□□ 1.33
TNNT3-207ENST00000381589 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.33
TNNT3-207ENST00000381589 NUP160Q12769 1436 aa23.31■■□□□ 1.32
TNNT3-207ENST00000381589 NPM1P06748 294 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNNT3-207ENST00000381589 ABCC10Q5T3U5 1492 aa23.26■■□□□ 1.31
TNNT3-207ENST00000381589 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms