RNA–Protein interactions for RNA: ENST00000568081.1

SCAMP5-216, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 2 BASIC

Gene SCAMP5, Length 710 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-216ENST00000568081 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
SCAMP5-216ENST00000568081 CCDC180Q9P1Z9 1646 aa28.66■■■□□ 2.18
SCAMP5-216ENST00000568081 ABCC9O60706 1549 aa28.45■■■□□ 2.15
SCAMP5-216ENST00000568081 DCAF8L2P0C7V8 631 aa27.3■■□□□ 1.96
SCAMP5-216ENST00000568081 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
SCAMP5-216ENST00000568081 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
SCAMP5-216ENST00000568081 NACADO15069 1562 aa27.04■■□□□ 1.92
SCAMP5-216ENST00000568081 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
SCAMP5-216ENST00000568081 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
SCAMP5-216ENST00000568081 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
SCAMP5-216ENST00000568081 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
SCAMP5-216ENST00000568081 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
SCAMP5-216ENST00000568081 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
SCAMP5-216ENST00000568081 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
SCAMP5-216ENST00000568081 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
SCAMP5-216ENST00000568081 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
SCAMP5-216ENST00000568081 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.69
SCAMP5-216ENST00000568081 EIF4G1Q04637 1599 aaKnown RBP25.54■■□□□ 1.68
SCAMP5-216ENST00000568081 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
SCAMP5-216ENST00000568081 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
SCAMP5-216ENST00000568081 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
SCAMP5-216ENST00000568081 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
SCAMP5-216ENST00000568081 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
SCAMP5-216ENST00000568081 DNAJC5Q9H3Z4 198 aa24.92■■□□□ 1.58
SCAMP5-216ENST00000568081 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
SCAMP5-216ENST00000568081 BAZ1BQ9UIG0 1483 aaKnown RBP24.8■■□□□ 1.56
SCAMP5-216ENST00000568081 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
SCAMP5-216ENST00000568081 PEG3Q9GZU2 1588 aa24.78■■□□□ 1.56
SCAMP5-216ENST00000568081 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
SCAMP5-216ENST00000568081 WIZO95785 1651 aa24.62■■□□□ 1.53
SCAMP5-216ENST00000568081 CUX2O14529 1486 aa24.54■■□□□ 1.52
SCAMP5-216ENST00000568081 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
SCAMP5-216ENST00000568081 NESP48681 1621 aa24.42■■□□□ 1.5
SCAMP5-216ENST00000568081 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
SCAMP5-216ENST00000568081 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
SCAMP5-216ENST00000568081 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
SCAMP5-216ENST00000568081 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
SCAMP5-216ENST00000568081 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
SCAMP5-216ENST00000568081 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
SCAMP5-216ENST00000568081 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
SCAMP5-216ENST00000568081 CFTRP13569 1480 aa24.09■■□□□ 1.45
SCAMP5-216ENST00000568081 FANCD2Q9BXW9 1451 aa23.98■■□□□ 1.43
SCAMP5-216ENST00000568081 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
SCAMP5-216ENST00000568081 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
SCAMP5-216ENST00000568081 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.42
SCAMP5-216ENST00000568081 PRDM2Q13029 1718 aa23.77■■□□□ 1.4
SCAMP5-216ENST00000568081 WDR62O43379 1518 aa23.74■■□□□ 1.39
SCAMP5-216ENST00000568081 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
SCAMP5-216ENST00000568081 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
SCAMP5-216ENST00000568081 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
SCAMP5-216ENST00000568081 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
SCAMP5-216ENST00000568081 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
SCAMP5-216ENST00000568081 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
SCAMP5-216ENST00000568081 IFT140Q96RY7 1462 aa23.46■■□□□ 1.35
SCAMP5-216ENST00000568081 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
SCAMP5-216ENST00000568081 SOGA1O94964 1423 aa23.36■■□□□ 1.33
SCAMP5-216ENST00000568081 CUX1P39880 1505 aa23.36■■□□□ 1.33
SCAMP5-216ENST00000568081 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
SCAMP5-216ENST00000568081 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
SCAMP5-216ENST00000568081 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
SCAMP5-216ENST00000568081 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
SCAMP5-216ENST00000568081 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
SCAMP5-216ENST00000568081 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.31
SCAMP5-216ENST00000568081 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
SCAMP5-216ENST00000568081 TOP2BQ02880 1626 aa23.17■■□□□ 1.3
SCAMP5-216ENST00000568081 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
SCAMP5-216ENST00000568081 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
SCAMP5-216ENST00000568081 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
SCAMP5-216ENST00000568081 FBLN2P98095 1184 aa23.11■■□□□ 1.29
SCAMP5-216ENST00000568081 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
SCAMP5-216ENST00000568081 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
SCAMP5-216ENST00000568081 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
SCAMP5-216ENST00000568081 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
SCAMP5-216ENST00000568081 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
SCAMP5-216ENST00000568081 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
SCAMP5-216ENST00000568081 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
SCAMP5-216ENST00000568081 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
SCAMP5-216ENST00000568081 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
SCAMP5-216ENST00000568081 CYB5RLQ6IPT4 315 aa23■■□□□ 1.27
SCAMP5-216ENST00000568081 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
SCAMP5-216ENST00000568081 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
SCAMP5-216ENST00000568081 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
SCAMP5-216ENST00000568081 SYNJ2O15056 1496 aa22.88■■□□□ 1.25
SCAMP5-216ENST00000568081 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
SCAMP5-216ENST00000568081 CHD1O14646 1710 aa22.86■■□□□ 1.25
SCAMP5-216ENST00000568081 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
SCAMP5-216ENST00000568081 ERICH3Q5RHP9 1530 aa22.82■■□□□ 1.24
SCAMP5-216ENST00000568081 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
SCAMP5-216ENST00000568081 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
SCAMP5-216ENST00000568081 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
SCAMP5-216ENST00000568081 IGF1RP08069 1367 aa22.75■■□□□ 1.23
SCAMP5-216ENST00000568081 GRIN2AQ12879 1464 aa22.71■■□□□ 1.23
SCAMP5-216ENST00000568081 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
SCAMP5-216ENST00000568081 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
SCAMP5-216ENST00000568081 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.22
SCAMP5-216ENST00000568081 CUL7Q14999 1698 aa22.59■■□□□ 1.21
SCAMP5-216ENST00000568081 NUP160Q12769 1436 aa22.59■■□□□ 1.21
SCAMP5-216ENST00000568081 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
SCAMP5-216ENST00000568081 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
SCAMP5-216ENST00000568081 CEP170Q5SW79 1584 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms