Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.82□□□□□ -0.04
C1RP00736 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
C1RP00736 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.82□□□□□ -0.04
C1RP00736 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.82□□□□□ -0.04
C1RP00736 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 AC093300.1-201ENST00000510368 1201 ntBASIC14.82□□□□□ -0.04
C1RP00736 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.82□□□□□ -0.04
C1RP00736 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.82□□□□□ -0.04
C1RP00736 AC068831.5-201ENST00000557387 328 ntBASIC14.82□□□□□ -0.04
C1RP00736 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.82□□□□□ -0.04
C1RP00736 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 AP005264.6-204ENST00000588436 719 ntBASIC14.82□□□□□ -0.04
C1RP00736 AC010976.2-201ENST00000609697 852 ntBASIC14.82□□□□□ -0.04
C1RP00736 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.82□□□□□ -0.04
C1RP00736 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
C1RP00736 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
C1RP00736 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
C1RP00736 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.82□□□□□ -0.04
C1RP00736 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.82□□□□□ -0.04
C1RP00736 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.82□□□□□ -0.04
C1RP00736 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.82□□□□□ -0.04
C1RP00736 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C1RP00736 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.82□□□□□ -0.04
C1RP00736 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.82□□□□□ -0.04
C1RP00736 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.81□□□□□ -0.04
C1RP00736 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.81□□□□□ -0.04
C1RP00736 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
C1RP00736 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.81□□□□□ -0.04
C1RP00736 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 USP17L6P-201ENST00000382470 1197 ntBASIC14.81□□□□□ -0.04
C1RP00736 ABCD1P4-201ENST00000399687 604 ntBASIC14.81□□□□□ -0.04
C1RP00736 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 AL451000.1-201ENST00000451300 1186 ntBASIC14.81□□□□□ -0.04
C1RP00736 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.81□□□□□ -0.04
C1RP00736 BPIFB5P-201ENST00000457066 1099 ntBASIC14.81□□□□□ -0.04
C1RP00736 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 AC012158.2-201ENST00000536546 354 ntBASIC14.81□□□□□ -0.04
C1RP00736 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 VENTXP3-201ENST00000546480 773 ntBASIC14.81□□□□□ -0.04
C1RP00736 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.81□□□□□ -0.04
C1RP00736 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.81□□□□□ -0.04
C1RP00736 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
C1RP00736 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
C1RP00736 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 AC015802.1-201ENST00000588104 1449 ntBASIC14.81□□□□□ -0.04
C1RP00736 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.81□□□□□ -0.04
C1RP00736 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.81□□□□□ -0.04
C1RP00736 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C1RP00736 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.8□□□□□ -0.04
C1RP00736 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
C1RP00736 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
C1RP00736 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
C1RP00736 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C1RP00736 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms