RNA–Protein interactions for RNA: ENST00000507600.1

LINC02228-201, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

TSL 2 BASIC

Gene LINC02228, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-201ENST00000507600 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
LINC02228-201ENST00000507600 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
LINC02228-201ENST00000507600 ABCC9O60706 1549 aa29.91■■■□□ 2.38
LINC02228-201ENST00000507600 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
LINC02228-201ENST00000507600 NACADO15069 1562 aa28.49■■■□□ 2.15
LINC02228-201ENST00000507600 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
LINC02228-201ENST00000507600 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
LINC02228-201ENST00000507600 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
LINC02228-201ENST00000507600 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
LINC02228-201ENST00000507600 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
LINC02228-201ENST00000507600 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
LINC02228-201ENST00000507600 BICRAQ9NZM4 1560 aa27.88■■■□□ 2.05
LINC02228-201ENST00000507600 PABPN1Q86U42 306 aaKnown RBP eCLIP27.82■■■□□ 2.04
LINC02228-201ENST00000507600 SCRIBQ14160 1630 aa27.56■■■□□ 2
LINC02228-201ENST00000507600 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
LINC02228-201ENST00000507600 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
LINC02228-201ENST00000507600 CC2D2AQ9P2K1 1620 aa27.1■■□□□ 1.93
LINC02228-201ENST00000507600 CECR2Q9BXF3 1484 aa26.91■■□□□ 1.9
LINC02228-201ENST00000507600 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
LINC02228-201ENST00000507600 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
LINC02228-201ENST00000507600 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
LINC02228-201ENST00000507600 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.78
LINC02228-201ENST00000507600 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
LINC02228-201ENST00000507600 HMGXB3Q12766 1538 aa26.17■■□□□ 1.78
LINC02228-201ENST00000507600 DNAJC5Q9H3Z4 198 aa26.14■■□□□ 1.78
LINC02228-201ENST00000507600 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
LINC02228-201ENST00000507600 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
LINC02228-201ENST00000507600 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
LINC02228-201ENST00000507600 NESP48681 1621 aa25.82■■□□□ 1.72
LINC02228-201ENST00000507600 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
LINC02228-201ENST00000507600 WIZO95785 1651 aa25.79■■□□□ 1.72
LINC02228-201ENST00000507600 CUX2O14529 1486 aa25.79■■□□□ 1.72
LINC02228-201ENST00000507600 LAMC3Q9Y6N6 1575 aa25.68■■□□□ 1.7
LINC02228-201ENST00000507600 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.69
LINC02228-201ENST00000507600 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
LINC02228-201ENST00000507600 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
LINC02228-201ENST00000507600 TOP2AP11388 1531 aaKnown RBP25.45■■□□□ 1.66
LINC02228-201ENST00000507600 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
LINC02228-201ENST00000507600 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
LINC02228-201ENST00000507600 CFTRP13569 1480 aa25.27■■□□□ 1.64
LINC02228-201ENST00000507600 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
LINC02228-201ENST00000507600 WDR62O43379 1518 aa25.23■■□□□ 1.63
LINC02228-201ENST00000507600 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
LINC02228-201ENST00000507600 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
LINC02228-201ENST00000507600 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
LINC02228-201ENST00000507600 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
LINC02228-201ENST00000507600 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
LINC02228-201ENST00000507600 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
LINC02228-201ENST00000507600 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
LINC02228-201ENST00000507600 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
LINC02228-201ENST00000507600 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
LINC02228-201ENST00000507600 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
LINC02228-201ENST00000507600 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
LINC02228-201ENST00000507600 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
LINC02228-201ENST00000507600 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
LINC02228-201ENST00000507600 EIF4G3O43432 1585 aaKnown RBP24.58■■□□□ 1.52
LINC02228-201ENST00000507600 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
LINC02228-201ENST00000507600 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
LINC02228-201ENST00000507600 CUX1P39880 1505 aa24.48■■□□□ 1.51
LINC02228-201ENST00000507600 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
LINC02228-201ENST00000507600 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
LINC02228-201ENST00000507600 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
LINC02228-201ENST00000507600 CHD1O14646 1710 aa24.38■■□□□ 1.49
LINC02228-201ENST00000507600 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
LINC02228-201ENST00000507600 SOGA1O94964 1423 aa24.35■■□□□ 1.49
LINC02228-201ENST00000507600 RIMBP3CA6NJZ7 1639 aa24.29■■□□□ 1.48
LINC02228-201ENST00000507600 RIMBP3BA6NNM3 1639 aa24.29■■□□□ 1.48
LINC02228-201ENST00000507600 RIMBP3Q9UFD9 1639 aa24.29■■□□□ 1.48
LINC02228-201ENST00000507600 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
LINC02228-201ENST00000507600 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
LINC02228-201ENST00000507600 ARHGEF11O15085 1522 aa24.2■■□□□ 1.47
LINC02228-201ENST00000507600 BIVM-ERCC5R4GMW8 1640 aa24.2■■□□□ 1.46
LINC02228-201ENST00000507600 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
LINC02228-201ENST00000507600 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
LINC02228-201ENST00000507600 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
LINC02228-201ENST00000507600 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
LINC02228-201ENST00000507600 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
LINC02228-201ENST00000507600 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
LINC02228-201ENST00000507600 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
LINC02228-201ENST00000507600 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
LINC02228-201ENST00000507600 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
LINC02228-201ENST00000507600 CLASP1Q7Z460 1538 aa24.08■■□□□ 1.45
LINC02228-201ENST00000507600 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
LINC02228-201ENST00000507600 FBLN2P98095 1184 aa24.06■■□□□ 1.44
LINC02228-201ENST00000507600 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
LINC02228-201ENST00000507600 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
LINC02228-201ENST00000507600 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
LINC02228-201ENST00000507600 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
LINC02228-201ENST00000507600 TRHP20396 242 aaPredicted RBP23.92■■□□□ 1.42
LINC02228-201ENST00000507600 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
LINC02228-201ENST00000507600 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
LINC02228-201ENST00000507600 CEP170Q5SW79 1584 aa23.83■■□□□ 1.41
LINC02228-201ENST00000507600 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
LINC02228-201ENST00000507600 NUP160Q12769 1436 aa23.79■■□□□ 1.4
LINC02228-201ENST00000507600 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
LINC02228-201ENST00000507600 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
LINC02228-201ENST00000507600 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
LINC02228-201ENST00000507600 CUL7Q14999 1698 aa23.6■■□□□ 1.37
LINC02228-201ENST00000507600 KIF27Q86VH2 1401 aa23.58■■□□□ 1.36
LINC02228-201ENST00000507600 IGF1RP08069 1367 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms