RNA–Protein interactions for RNA: ENST00000378618.6

C11orf49-203, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 5 BASIC

Gene C11orf49, Length 1,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-203ENST00000378618 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
C11orf49-203ENST00000378618 ABCC9O60706 1549 aa30.28■■■□□ 2.44
C11orf49-203ENST00000378618 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
C11orf49-203ENST00000378618 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
C11orf49-203ENST00000378618 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
C11orf49-203ENST00000378618 NACADO15069 1562 aa28.54■■■□□ 2.16
C11orf49-203ENST00000378618 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
C11orf49-203ENST00000378618 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
C11orf49-203ENST00000378618 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
C11orf49-203ENST00000378618 UNC13AQ9UPW8 1703 aa27.94■■■□□ 2.06
C11orf49-203ENST00000378618 BICRAQ9NZM4 1560 aa27.89■■■□□ 2.05
C11orf49-203ENST00000378618 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
C11orf49-203ENST00000378618 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
C11orf49-203ENST00000378618 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
C11orf49-203ENST00000378618 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
C11orf49-203ENST00000378618 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
C11orf49-203ENST00000378618 CC2D2AQ9P2K1 1620 aa27.32■■□□□ 1.96
C11orf49-203ENST00000378618 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
C11orf49-203ENST00000378618 DNAJC5Q9H3Z4 198 aa26.46■■□□□ 1.83
C11orf49-203ENST00000378618 NCAPD3P42695 1498 aa26.39■■□□□ 1.82
C11orf49-203ENST00000378618 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
C11orf49-203ENST00000378618 CUX2O14529 1486 aa26.23■■□□□ 1.79
C11orf49-203ENST00000378618 ERCC6Q03468 1493 aa26.18■■□□□ 1.78
C11orf49-203ENST00000378618 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
C11orf49-203ENST00000378618 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
C11orf49-203ENST00000378618 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
C11orf49-203ENST00000378618 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
C11orf49-203ENST00000378618 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
C11orf49-203ENST00000378618 NESP48681 1621 aa25.94■■□□□ 1.74
C11orf49-203ENST00000378618 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
C11orf49-203ENST00000378618 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
C11orf49-203ENST00000378618 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
C11orf49-203ENST00000378618 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
C11orf49-203ENST00000378618 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
C11orf49-203ENST00000378618 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
C11orf49-203ENST00000378618 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
C11orf49-203ENST00000378618 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
C11orf49-203ENST00000378618 WIZO95785 1651 aa25.39■■□□□ 1.65
C11orf49-203ENST00000378618 WDR62O43379 1518 aa25.36■■□□□ 1.65
C11orf49-203ENST00000378618 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
C11orf49-203ENST00000378618 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
C11orf49-203ENST00000378618 CFTRP13569 1480 aa25.22■■□□□ 1.63
C11orf49-203ENST00000378618 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.63
C11orf49-203ENST00000378618 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
C11orf49-203ENST00000378618 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
C11orf49-203ENST00000378618 OSCARQ8IYS5 282 aa25.04■■□□□ 1.6
C11orf49-203ENST00000378618 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
C11orf49-203ENST00000378618 CCDC88BA6NC98 1476 aa24.85■■□□□ 1.57
C11orf49-203ENST00000378618 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
C11orf49-203ENST00000378618 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
C11orf49-203ENST00000378618 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
C11orf49-203ENST00000378618 TOPBP1Q92547 1522 aa24.73■■□□□ 1.55
C11orf49-203ENST00000378618 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
C11orf49-203ENST00000378618 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
C11orf49-203ENST00000378618 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
C11orf49-203ENST00000378618 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
C11orf49-203ENST00000378618 DNMBPQ6XZF7 1577 aa24.61■■□□□ 1.53
C11orf49-203ENST00000378618 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
C11orf49-203ENST00000378618 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
C11orf49-203ENST00000378618 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
C11orf49-203ENST00000378618 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
C11orf49-203ENST00000378618 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
C11orf49-203ENST00000378618 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
C11orf49-203ENST00000378618 FBLN2P98095 1184 aa24.4■■□□□ 1.5
C11orf49-203ENST00000378618 SOGA1O94964 1423 aa24.39■■□□□ 1.5
C11orf49-203ENST00000378618 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
C11orf49-203ENST00000378618 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
C11orf49-203ENST00000378618 CHD1O14646 1710 aa24.35■■□□□ 1.49
C11orf49-203ENST00000378618 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
C11orf49-203ENST00000378618 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
C11orf49-203ENST00000378618 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
C11orf49-203ENST00000378618 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
C11orf49-203ENST00000378618 CHMP7Q8WUX9 453 aaPredicted RBP24.23■■□□□ 1.47
C11orf49-203ENST00000378618 CUX1P39880 1505 aa24.22■■□□□ 1.47
C11orf49-203ENST00000378618 MAGI1Q96QZ7 1491 aaPredicted RBP24.21■■□□□ 1.47
C11orf49-203ENST00000378618 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
C11orf49-203ENST00000378618 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
C11orf49-203ENST00000378618 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
C11orf49-203ENST00000378618 SYNJ1O43426 1573 aa24.14■■□□□ 1.45
C11orf49-203ENST00000378618 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
C11orf49-203ENST00000378618 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
C11orf49-203ENST00000378618 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
C11orf49-203ENST00000378618 PBRM1Q86U86 1689 aa23.95■■□□□ 1.42
C11orf49-203ENST00000378618 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
C11orf49-203ENST00000378618 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
C11orf49-203ENST00000378618 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
C11orf49-203ENST00000378618 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
C11orf49-203ENST00000378618 NUP160Q12769 1436 aa23.82■■□□□ 1.4
C11orf49-203ENST00000378618 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
C11orf49-203ENST00000378618 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
C11orf49-203ENST00000378618 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
C11orf49-203ENST00000378618 BIVM-ERCC5R4GMW8 1640 aa23.75■■□□□ 1.39
C11orf49-203ENST00000378618 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
C11orf49-203ENST00000378618 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
C11orf49-203ENST00000378618 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
C11orf49-203ENST00000378618 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
C11orf49-203ENST00000378618 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
C11orf49-203ENST00000378618 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
C11orf49-203ENST00000378618 JPH4Q96JJ6 628 aa23.59■■□□□ 1.37
C11orf49-203ENST00000378618 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms