RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 NISCHQ9Y2I1 1504 aa33.69■■■□□ 2.98
FAM3B-201ENST00000357985 CCDC180Q9P1Z9 1646 aa30.43■■■□□ 2.46
FAM3B-201ENST00000357985 ABCC9O60706 1549 aa30.23■■■□□ 2.43
FAM3B-201ENST00000357985 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
FAM3B-201ENST00000357985 NACADO15069 1562 aa28.67■■■□□ 2.18
FAM3B-201ENST00000357985 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
FAM3B-201ENST00000357985 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
FAM3B-201ENST00000357985 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
FAM3B-201ENST00000357985 DNAJC5BQ9UF47 199 aa28.19■■■□□ 2.1
FAM3B-201ENST00000357985 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
FAM3B-201ENST00000357985 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
FAM3B-201ENST00000357985 ZCCHC6Q5VYS8 1495 aaKnown RBP27.96■■■□□ 2.07
FAM3B-201ENST00000357985 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
FAM3B-201ENST00000357985 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
FAM3B-201ENST00000357985 SCRIBQ14160 1630 aa27.62■■■□□ 2.01
FAM3B-201ENST00000357985 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
FAM3B-201ENST00000357985 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
FAM3B-201ENST00000357985 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
FAM3B-201ENST00000357985 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
FAM3B-201ENST00000357985 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
FAM3B-201ENST00000357985 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
FAM3B-201ENST00000357985 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
FAM3B-201ENST00000357985 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
FAM3B-201ENST00000357985 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
FAM3B-201ENST00000357985 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
FAM3B-201ENST00000357985 CUX2O14529 1486 aa26.15■■□□□ 1.78
FAM3B-201ENST00000357985 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
FAM3B-201ENST00000357985 BAZ1BQ9UIG0 1483 aaKnown RBP26.09■■□□□ 1.77
FAM3B-201ENST00000357985 DNAJC5Q9H3Z4 198 aa25.97■■□□□ 1.75
FAM3B-201ENST00000357985 NESP48681 1621 aa25.95■■□□□ 1.74
FAM3B-201ENST00000357985 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
FAM3B-201ENST00000357985 LAMC3Q9Y6N6 1575 aa25.9■■□□□ 1.74
FAM3B-201ENST00000357985 THOC2Q8NI27 1593 aaKnown RBP25.84■■□□□ 1.73
FAM3B-201ENST00000357985 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
FAM3B-201ENST00000357985 WIZO95785 1651 aa25.68■■□□□ 1.7
FAM3B-201ENST00000357985 PDS5BQ9NTI5 1447 aa25.65■■□□□ 1.7
FAM3B-201ENST00000357985 CADPSQ9ULU8 1353 aa25.54■■□□□ 1.68
FAM3B-201ENST00000357985 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
FAM3B-201ENST00000357985 WDR62O43379 1518 aa25.44■■□□□ 1.66
FAM3B-201ENST00000357985 TOP2AP11388 1531 aaKnown RBP25.39■■□□□ 1.66
FAM3B-201ENST00000357985 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
FAM3B-201ENST00000357985 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
FAM3B-201ENST00000357985 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
FAM3B-201ENST00000357985 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
FAM3B-201ENST00000357985 CFTRP13569 1480 aa25.28■■□□□ 1.64
FAM3B-201ENST00000357985 URB2Q14146 1524 aaKnown RBP25.09■■□□□ 1.61
FAM3B-201ENST00000357985 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
FAM3B-201ENST00000357985 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
FAM3B-201ENST00000357985 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
FAM3B-201ENST00000357985 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
FAM3B-201ENST00000357985 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
FAM3B-201ENST00000357985 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
FAM3B-201ENST00000357985 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
FAM3B-201ENST00000357985 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
FAM3B-201ENST00000357985 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
FAM3B-201ENST00000357985 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
FAM3B-201ENST00000357985 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
FAM3B-201ENST00000357985 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
FAM3B-201ENST00000357985 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
FAM3B-201ENST00000357985 CHD1O14646 1710 aa24.61■■□□□ 1.53
FAM3B-201ENST00000357985 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
FAM3B-201ENST00000357985 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
FAM3B-201ENST00000357985 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
FAM3B-201ENST00000357985 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.51
FAM3B-201ENST00000357985 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
FAM3B-201ENST00000357985 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
FAM3B-201ENST00000357985 SOGA1O94964 1423 aa24.4■■□□□ 1.5
FAM3B-201ENST00000357985 CUX1P39880 1505 aa24.39■■□□□ 1.49
FAM3B-201ENST00000357985 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
FAM3B-201ENST00000357985 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
FAM3B-201ENST00000357985 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
FAM3B-201ENST00000357985 FBLN2P98095 1184 aa24.3■■□□□ 1.48
FAM3B-201ENST00000357985 MAGI1Q96QZ7 1491 aaPredicted RBP24.3■■□□□ 1.48
FAM3B-201ENST00000357985 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
FAM3B-201ENST00000357985 ARAP1Q96P48 1450 aa24.27■■□□□ 1.48
FAM3B-201ENST00000357985 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
FAM3B-201ENST00000357985 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
FAM3B-201ENST00000357985 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
FAM3B-201ENST00000357985 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
FAM3B-201ENST00000357985 CYB5RLQ6IPT4 315 aa24.19■■□□□ 1.46
FAM3B-201ENST00000357985 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
FAM3B-201ENST00000357985 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
FAM3B-201ENST00000357985 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
FAM3B-201ENST00000357985 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
FAM3B-201ENST00000357985 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
FAM3B-201ENST00000357985 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
FAM3B-201ENST00000357985 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
FAM3B-201ENST00000357985 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
FAM3B-201ENST00000357985 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
FAM3B-201ENST00000357985 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
FAM3B-201ENST00000357985 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
FAM3B-201ENST00000357985 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
FAM3B-201ENST00000357985 NUP160Q12769 1436 aa23.86■■□□□ 1.41
FAM3B-201ENST00000357985 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
FAM3B-201ENST00000357985 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
FAM3B-201ENST00000357985 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
FAM3B-201ENST00000357985 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
FAM3B-201ENST00000357985 CUL7Q14999 1698 aa23.62■■□□□ 1.37
FAM3B-201ENST00000357985 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
FAM3B-201ENST00000357985 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms