Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.14□□□□□ -1.272e-6■■□□□ 14.3
DDX52Q9Y2R4 TGFBR3-210ENST00000533089 6455 ntTSL 1 (best)6.99□□□□□ -1.293e-6■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.574e-7■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.524e-7■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-218ENST00000549455 568 ntTSL 417.19■□□□□ 0.344e-7■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.274e-7■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)13.09□□□□□ -0.314e-7■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.334e-7■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.054e-7■■□□□ 14.3
DDX52Q9Y2R4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.344e-7■■□□□ 14.3
DDX52Q9Y2R4 ACTB-211ENST00000480301 657 ntTSL 1 (best)24.93■■□□□ 1.583e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-212ENST00000484841 1032 ntTSL 523.84■■□□□ 1.413e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-210ENST00000477812 820 ntTSL 223.73■■□□□ 1.393e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.933e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-207ENST00000462494 2245 ntTSL 519.28■□□□□ 0.683e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-205ENST00000432588 568 ntTSL 419.18■□□□□ 0.663e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-206ENST00000443528 569 ntTSL 418.71■□□□□ 0.593e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-202ENST00000414620 561 ntTSL 418.46■□□□□ 0.553e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-204ENST00000425660 1845 ntTSL 1 (best)17.86■□□□□ 0.453e-23■■□□□ 14.2
DDX52Q9Y2R4 ACTB-209ENST00000473257 556 ntTSL 313.32□□□□□ -0.283e-23■■□□□ 14.2
DDX52Q9Y2R4 ELF2-209ENST00000511184 1766 ntTSL 532.91■■■□□ 2.862e-6■■□□□ 14.2
DDX52Q9Y2R4 ELF2-208ENST00000511006 1434 ntTSL 1 (best)26.46■■□□□ 1.832e-6■■□□□ 14.2
DDX52Q9Y2R4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.382e-6■■□□□ 14.2
DDX52Q9Y2R4 TMC6-211ENST00000589271 1099 ntTSL 520.3■□□□□ 0.848e-7■■□□□ 14.2
DDX52Q9Y2R4 TMC6-221ENST00000592063 743 ntTSL 516.57■□□□□ 0.248e-7■■□□□ 14.2
DDX52Q9Y2R4 SMG1P3-201ENST00000435197 416 ntTSL 321.3■■□□□ 13e-7■■□□□ 14.2
DDX52Q9Y2R4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.922e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-209ENST00000630114 1433 ntTSL 524.53■■□□□ 1.522e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)23.66■■□□□ 1.382e-11■■□□□ 14.2
DDX52Q9Y2R4 SEPT5-212ENST00000470814 2353 ntTSL 523.18■■□□□ 1.32e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.912e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)20.47■□□□□ 0.872e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.752e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-205ENST00000514511 1143 ntTSL 219.3■□□□□ 0.682e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.282e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC15.22■□□□□ 0.032e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.412e-11■■□□□ 14.2
DDX52Q9Y2R4 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.892e-11■■□□□ 14.2
DDX52Q9Y2R4 BCOR-207ENST00000412952 288 ntTSL 515.7■□□□□ 0.12e-6■■□□□ 14.1
DDX52Q9Y2R4 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.552e-6■■□□□ 14.1
DDX52Q9Y2R4 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.752e-6■■□□□ 14.1
DDX52Q9Y2R4 FAM178B-205ENST00000494172 592 ntTSL 321.43■■□□□ 1.021e-6■■□□□ 14.1
DDX52Q9Y2R4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.791e-6■■□□□ 14.1
DDX52Q9Y2R4 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.061e-6■■□□□ 14.1
DDX52Q9Y2R4 FAM178B-202ENST00000470789 722 ntTSL 1 (best)13.54□□□□□ -0.241e-6■■□□□ 14.1
DDX52Q9Y2R4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.657e-7■■□□□ 14
DDX52Q9Y2R4 HP1BP3-209ENST00000437575 473 ntTSL 330.13■■■□□ 2.411e-7■■□□□ 14
DDX52Q9Y2R4 HP1BP3-210ENST00000438032 1159 ntTSL 524.23■■□□□ 1.471e-7■■□□□ 14
DDX52Q9Y2R4 HP1BP3-208ENST00000424732 970 ntTSL 321.52■■□□□ 1.041e-7■■□□□ 14
DDX52Q9Y2R4 ACVR2B-203ENST00000465020 1666 ntTSL 221.27■■□□□ 11e-7■■□□□ 14
DDX52Q9Y2R4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.51■□□□□ 0.711e-7■■□□□ 14
DDX52Q9Y2R4 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.691e-7■■□□□ 14
DDX52Q9Y2R4 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.871e-7■■□□□ 14
DDX52Q9Y2R4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.141e-7■■□□□ 14
DDX52Q9Y2R4 FOXK2-208ENST00000571160 496 ntTSL 515.65■□□□□ 0.16e-7■■□□□ 14
DDX52Q9Y2R4 C22orf34-206ENST00000444628 453 ntTSL 512.9□□□□□ -0.348e-8■■□□□ 13.9
DDX52Q9Y2R4 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.098e-7■■□□□ 13.9
DDX52Q9Y2R4 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.138e-7■■□□□ 13.9
DDX52Q9Y2R4 HSPG2-211ENST00000486901 3586 ntTSL 213.63□□□□□ -0.233e-10■■□□□ 13.9
DDX52Q9Y2R4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.29■■□□□ 1.643e-13■■□□□ 13.9
DDX52Q9Y2R4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.75■■□□□ 1.556e-6■■□□□ 13.9
DDX52Q9Y2R4 ARFRP1-211ENST00000618568 1612 ntTSL 324.42■■□□□ 1.56e-6■■□□□ 13.9
DDX52Q9Y2R4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.346e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-206ENST00000524500 573 ntTSL 422.36■■□□□ 1.176e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-233ENST00000534636 633 ntTSL 421.86■■□□□ 1.096e-6■■□□□ 13.9
DDX52Q9Y2R4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.82■■□□□ 1.086e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-222ENST00000531551 1855 ntTSL 1 (best)20.88■□□□□ 0.936e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.96e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-226ENST00000532656 573 ntTSL 420.34■□□□□ 0.856e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-229ENST00000533572 975 ntTSL 320.28■□□□□ 0.846e-6■■□□□ 13.9
DDX52Q9Y2R4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.846e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.796e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.746e-6■■□□□ 13.9
DDX52Q9Y2R4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.62■□□□□ 0.736e-6■■□□□ 13.9
DDX52Q9Y2R4 NDE1-205ENST00000572756 915 ntTSL 519.23■□□□□ 0.676e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-210ENST00000526195 560 ntTSL 419.2■□□□□ 0.666e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-213ENST00000527215 545 ntTSL 419.13■□□□□ 0.656e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.646e-6■■□□□ 13.9
DDX52Q9Y2R4 MIR210HG-202ENST00000528245 659 ntTSL 319.02■□□□□ 0.643e-13■■□□□ 13.9
DDX52Q9Y2R4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.02■□□□□ 0.643e-13■■□□□ 13.9
DDX52Q9Y2R4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.596e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-215ENST00000528965 556 ntTSL 318.51■□□□□ 0.556e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.536e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.536e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-208ENST00000525076 550 ntTSL 517.98■□□□□ 0.476e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-230ENST00000534149 524 ntTSL 417.7■□□□□ 0.426e-6■■□□□ 13.9
DDX52Q9Y2R4 NDE1-203ENST00000570727 588 ntTSL 417.58■□□□□ 0.46e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-224ENST00000532392 570 ntTSL 417.25■□□□□ 0.356e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-231ENST00000534382 764 ntTSL 417.25■□□□□ 0.356e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-221ENST00000531502 557 ntTSL 417.11■□□□□ 0.336e-6■■□□□ 13.9
DDX52Q9Y2R4 MIR210HG-204ENST00000534540 367 ntTSL 217■□□□□ 0.313e-13■■□□□ 13.9
DDX52Q9Y2R4 CTSB-217ENST00000530296 561 ntTSL 416.64■□□□□ 0.256e-6■■□□□ 13.9
DDX52Q9Y2R4 SSBP3-201ENST00000326956 2913 ntTSL 216.25■□□□□ 0.196e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-209ENST00000533096 547 ntTSL 415.37■□□□□ 0.056e-6■■□□□ 13.9
DDX52Q9Y2R4 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC15.29■□□□□ 0.046e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-206ENST00000529210 607 ntTSL 414.37□□□□□ -0.116e-6■■□□□ 13.9
DDX52Q9Y2R4 CTSB-212ENST00000526645 559 ntTSL 412.72□□□□□ -0.376e-6■■□□□ 13.9
DDX52Q9Y2R4 COPB1-207ENST00000529866 729 ntTSL 212.27□□□□□ -0.456e-6■■□□□ 13.9
DDX52Q9Y2R4 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.456e-6■■□□□ 13.9
DDX52Q9Y2R4 MIR210-201ENST00000362168 110 ntBASIC12.11□□□□□ -0.473e-13■■□□□ 13.9
Retrieved 100 of 4,483 protein–RNA pairs in 75.2 ms