RNA–Protein interactions for RNA: ENST00000618568.4

ARFRP1-211, Transcript of ADP ribosylation factor related protein 1, humanhuman

TSL 3

Gene ARFRP1, Length 1,612 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFRP1-211ENST00000618568 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
ARFRP1-211ENST00000618568 CCDC180Q9P1Z9 1646 aa42.55■■■■■ 4.4
ARFRP1-211ENST00000618568 ABCC9O60706 1549 aa40.77■■■■■ 4.12
ARFRP1-211ENST00000618568 ZCCHC6Q5VYS8 1495 aaKnown RBP40.46■■■■■ 4.07
ARFRP1-211ENST00000618568 DCAF8L2P0C7V8 631 aa40.05■■■■■ 4
ARFRP1-211ENST00000618568 DCAF1Q9Y4B6 1507 aa40.03■■■■■ 4
ARFRP1-211ENST00000618568 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
ARFRP1-211ENST00000618568 NACADO15069 1562 aa39.8■■■■□ 3.96
ARFRP1-211ENST00000618568 RB1CC1Q8TDY2 1594 aa39.62■■■■□ 3.93
ARFRP1-211ENST00000618568 SCRIBQ14160 1630 aa38.93■■■■□ 3.82
ARFRP1-211ENST00000618568 SHROOM4Q9ULL8 1493 aa38.78■■■■□ 3.8
ARFRP1-211ENST00000618568 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
ARFRP1-211ENST00000618568 BICRAQ9NZM4 1560 aa38.37■■■■□ 3.73
ARFRP1-211ENST00000618568 PABPN1Q86U42 306 aaKnown RBP eCLIP38.27■■■■□ 3.726e-7■■■□□ 16.5
ARFRP1-211ENST00000618568 CECR2Q9BXF3 1484 aa37.55■■■■□ 3.6
ARFRP1-211ENST00000618568 BAZ1AQ9NRL2 1556 aaPredicted RBP37.41■■■■□ 3.58
ARFRP1-211ENST00000618568 SMARCA4P51532 1647 aa37.31■■■■□ 3.56
ARFRP1-211ENST00000618568 EIF4G1Q04637 1599 aaKnown RBP37.3■■■■□ 3.56
ARFRP1-211ENST00000618568 MROH2BQ7Z745 1585 aa37.27■■■■□ 3.56
ARFRP1-211ENST00000618568 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
ARFRP1-211ENST00000618568 SUPT5HO00267 1087 aaKnown RBP36.97■■■■□ 3.51
ARFRP1-211ENST00000618568 PEG3Q9GZU2 1588 aa36.92■■■■□ 3.5
ARFRP1-211ENST00000618568 CC2D2AQ9P2K1 1620 aa36.92■■■■□ 3.5
ARFRP1-211ENST00000618568 WIZO95785 1651 aa36.92■■■■□ 3.5
ARFRP1-211ENST00000618568 SMARCA2P51531 1590 aa36.88■■■■□ 3.49
ARFRP1-211ENST00000618568 ATAD2BQ9ULI0 1458 aa36.88■■■■□ 3.49
ARFRP1-211ENST00000618568 DNAJC5BQ9UF47 199 aa36.74■■■■□ 3.47
ARFRP1-211ENST00000618568 NCAPD3P42695 1498 aa36.71■■■■□ 3.47
ARFRP1-211ENST00000618568 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
ARFRP1-211ENST00000618568 HMGXB3Q12766 1538 aa36.62■■■■□ 3.45
ARFRP1-211ENST00000618568 TOP2AP11388 1531 aaKnown RBP36.58■■■■□ 3.45
ARFRP1-211ENST00000618568 CCDC88BA6NC98 1476 aa36.15■■■■□ 3.38
ARFRP1-211ENST00000618568 CADPSQ9ULU8 1353 aa35.71■■■■□ 3.31
ARFRP1-211ENST00000618568 CFTRP13569 1480 aa35.68■■■■□ 3.3
ARFRP1-211ENST00000618568 LAMC3Q9Y6N6 1575 aa35.6■■■■□ 3.29
ARFRP1-211ENST00000618568 NESP48681 1621 aa35.55■■■■□ 3.28
ARFRP1-211ENST00000618568 PRDM2Q13029 1718 aa35.48■■■■□ 3.27
ARFRP1-211ENST00000618568 PDS5BQ9NTI5 1447 aa35.34■■■■□ 3.25
ARFRP1-211ENST00000618568 FANCD2Q9BXW9 1451 aa35.29■■■■□ 3.24
ARFRP1-211ENST00000618568 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
ARFRP1-211ENST00000618568 KIF21AQ7Z4S6 1674 aa35.15■■■■□ 3.22
ARFRP1-211ENST00000618568 ABCC8Q09428 1581 aa35.12■■■■□ 3.21
ARFRP1-211ENST00000618568 ERCC6Q03468 1493 aa35.08■■■■□ 3.21
ARFRP1-211ENST00000618568 WRNQ14191 1432 aaPredicted RBP eCLIP35.05■■■■□ 3.2
ARFRP1-211ENST00000618568 CHIC1Q5VXU3 224 aa35.04■■■■□ 3.2
ARFRP1-211ENST00000618568 MRC2Q9UBG0 1479 aa34.91■■■■□ 3.18
ARFRP1-211ENST00000618568 CUX1P39880 1505 aa34.91■■■■□ 3.18
ARFRP1-211ENST00000618568 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
ARFRP1-211ENST00000618568 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
ARFRP1-211ENST00000618568 URB2Q14146 1524 aaKnown RBP34.87■■■■□ 3.17
ARFRP1-211ENST00000618568 DNMBPQ6XZF7 1577 aa34.87■■■■□ 3.17
ARFRP1-211ENST00000618568 TOP2BQ02880 1626 aa34.86■■■■□ 3.17
ARFRP1-211ENST00000618568 BIVM-ERCC5R4GMW8 1640 aa34.84■■■■□ 3.17
ARFRP1-211ENST00000618568 TOPBP1Q92547 1522 aa34.83■■■■□ 3.17
ARFRP1-211ENST00000618568 THOC2Q8NI27 1593 aaKnown RBP34.8■■■■□ 3.16
ARFRP1-211ENST00000618568 WDR62O43379 1518 aa34.76■■■■□ 3.16
ARFRP1-211ENST00000618568 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
ARFRP1-211ENST00000618568 POLA1P09884 1462 aaPredicted RBP34.6■■■■□ 3.13
ARFRP1-211ENST00000618568 SOGA1O94964 1423 aa34.48■■■■□ 3.11
ARFRP1-211ENST00000618568 CUX2O14529 1486 aa34.45■■■■□ 3.1
ARFRP1-211ENST00000618568 RAD54L2Q9Y4B4 1467 aa34.44■■■■□ 3.1
ARFRP1-211ENST00000618568 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
ARFRP1-211ENST00000618568 ABCA10Q8WWZ4 1543 aa34.37■■■■□ 3.09
ARFRP1-211ENST00000618568 TARBP1Q13395 1621 aaKnown RBP34.36■■■■□ 3.09
ARFRP1-211ENST00000618568 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
ARFRP1-211ENST00000618568 KIF27Q86VH2 1401 aa34.24■■■■□ 3.07
ARFRP1-211ENST00000618568 EEA1Q15075 1411 aa34.21■■■■□ 3.07
ARFRP1-211ENST00000618568 RUSC2Q8N2Y8 1516 aa34.2■■■■□ 3.07
ARFRP1-211ENST00000618568 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
ARFRP1-211ENST00000618568 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
ARFRP1-211ENST00000618568 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
ARFRP1-211ENST00000618568 FAM9AQ8IZU1 332 aaPredicted RBP34.13■■■■□ 3.05
ARFRP1-211ENST00000618568 GAPVD1Q14C86 1478 aa34.1■■■■□ 3.05
ARFRP1-211ENST00000618568 AQRO60306 1485 aaKnown RBP eCLIP34.08■■■■□ 3.057e-7■■■□□ 18.4
ARFRP1-211ENST00000618568 EIF4G3O43432 1585 aaKnown RBP34.06■■■■□ 3.04
ARFRP1-211ENST00000618568 CSRNP3Q8WYN3 585 aa34.03■■■■□ 3.04
ARFRP1-211ENST00000618568 IGF1RP08069 1367 aa33.98■■■■□ 3.03
ARFRP1-211ENST00000618568 ERICH3Q5RHP9 1530 aa33.97■■■■□ 3.03
ARFRP1-211ENST00000618568 GRIN2BQ13224 1484 aa33.96■■■■□ 3.03
ARFRP1-211ENST00000618568 PBRM1Q86U86 1689 aa33.95■■■■□ 3.03
ARFRP1-211ENST00000618568 CUL7Q14999 1698 aa33.84■■■■□ 3.01
ARFRP1-211ENST00000618568 PRXQ9BXM0 1461 aa33.81■■■■□ 3
ARFRP1-211ENST00000618568 CARMIL1Q5VZK9 1371 aa33.81■■■■□ 3
ARFRP1-211ENST00000618568 SNAPC4Q5SXM2 1469 aa33.79■■■■□ 3
ARFRP1-211ENST00000618568 MAGI1Q96QZ7 1491 aaPredicted RBP33.78■■■■□ 3
ARFRP1-211ENST00000618568 KIF21BO75037 1637 aa33.77■■■■□ 3
ARFRP1-211ENST00000618568 ADAMTS12P58397 1594 aa33.75■■■□□ 2.99
ARFRP1-211ENST00000618568 FHAD1B1AJZ9 1412 aa33.74■■■□□ 2.99
ARFRP1-211ENST00000618568 RAPGEF2Q9Y4G8 1499 aa33.71■■■□□ 2.99
ARFRP1-211ENST00000618568 GOLGA3Q08378 1498 aa33.67■■■□□ 2.98
ARFRP1-211ENST00000618568 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
ARFRP1-211ENST00000618568 EHMT2Q96KQ7 1210 aa33.62■■■□□ 2.97
ARFRP1-211ENST00000618568 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
ARFRP1-211ENST00000618568 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.96
ARFRP1-211ENST00000618568 GRIN2AQ12879 1464 aa33.52■■■□□ 2.96
ARFRP1-211ENST00000618568 FBLN2P98095 1184 aa33.52■■■□□ 2.96
ARFRP1-211ENST00000618568 UBTFP17480 764 aaKnown RBP33.5■■■□□ 2.95
ARFRP1-211ENST00000618568 CHD1O14646 1710 aa33.44■■■□□ 2.94
ARFRP1-211ENST00000618568 TNIKQ9UKE5 1360 aa33.41■■■□□ 2.94
ARFRP1-211ENST00000618568 CTTNBP2Q8WZ74 1663 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms