RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
NDE1-203ENST00000570727 ABCC9O60706 1549 aa33.21■■■□□ 2.91
NDE1-203ENST00000570727 CCDC180Q9P1Z9 1646 aa33.2■■■□□ 2.9
NDE1-203ENST00000570727 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
NDE1-203ENST00000570727 NACADO15069 1562 aa31.4■■■□□ 2.62
NDE1-203ENST00000570727 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
NDE1-203ENST00000570727 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
NDE1-203ENST00000570727 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
NDE1-203ENST00000570727 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
NDE1-203ENST00000570727 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
NDE1-203ENST00000570727 BICRAQ9NZM4 1560 aa30.74■■■□□ 2.51
NDE1-203ENST00000570727 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
NDE1-203ENST00000570727 DCAF1Q9Y4B6 1507 aa30.61■■■□□ 2.49
NDE1-203ENST00000570727 SCRIBQ14160 1630 aa30.26■■■□□ 2.44
NDE1-203ENST00000570727 SHROOM4Q9ULL8 1493 aa30.24■■■□□ 2.43
NDE1-203ENST00000570727 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
NDE1-203ENST00000570727 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
NDE1-203ENST00000570727 CECR2Q9BXF3 1484 aa29.9■■■□□ 2.38
NDE1-203ENST00000570727 NCAPD3P42695 1498 aa29.03■■■□□ 2.24
NDE1-203ENST00000570727 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
NDE1-203ENST00000570727 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
NDE1-203ENST00000570727 SMARCA2P51531 1590 aa28.81■■■□□ 2.2
NDE1-203ENST00000570727 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
NDE1-203ENST00000570727 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
NDE1-203ENST00000570727 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
NDE1-203ENST00000570727 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
NDE1-203ENST00000570727 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
NDE1-203ENST00000570727 DNAJC5Q9H3Z4 198 aa28.61■■■□□ 2.17
NDE1-203ENST00000570727 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
NDE1-203ENST00000570727 CUX2O14529 1486 aa28.58■■■□□ 2.17
NDE1-203ENST00000570727 NESP48681 1621 aa28.57■■■□□ 2.16
NDE1-203ENST00000570727 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.12
NDE1-203ENST00000570727 WIZO95785 1651 aa28.24■■■□□ 2.11
NDE1-203ENST00000570727 THOC2Q8NI27 1593 aaKnown RBP28.22■■■□□ 2.11
NDE1-203ENST00000570727 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
NDE1-203ENST00000570727 KIF21AQ7Z4S6 1674 aa28.16■■■□□ 2.1
NDE1-203ENST00000570727 CADPSQ9ULU8 1353 aa28.14■■■□□ 2.1
NDE1-203ENST00000570727 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.07
NDE1-203ENST00000570727 MRC2Q9UBG0 1479 aa27.91■■■□□ 2.06
NDE1-203ENST00000570727 WDR62O43379 1518 aa27.84■■■□□ 2.05
NDE1-203ENST00000570727 TOP2AP11388 1531 aaKnown RBP27.84■■■□□ 2.05
NDE1-203ENST00000570727 CFTRP13569 1480 aa27.83■■■□□ 2.04
NDE1-203ENST00000570727 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
NDE1-203ENST00000570727 CEP164Q9UPV0 1460 aa27.8■■■□□ 2.04
NDE1-203ENST00000570727 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
NDE1-203ENST00000570727 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
NDE1-203ENST00000570727 PRDM2Q13029 1718 aa27.51■■□□□ 1.99
NDE1-203ENST00000570727 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
NDE1-203ENST00000570727 TRIM41Q8WV44 630 aa27.33■■□□□ 1.97
NDE1-203ENST00000570727 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
NDE1-203ENST00000570727 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
NDE1-203ENST00000570727 ZNF608Q9ULD9 1512 aaPredicted RBP27.25■■□□□ 1.95
NDE1-203ENST00000570727 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
NDE1-203ENST00000570727 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
NDE1-203ENST00000570727 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
NDE1-203ENST00000570727 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
NDE1-203ENST00000570727 AQRO60306 1485 aaKnown RBP eCLIP27.02■■□□□ 1.92
NDE1-203ENST00000570727 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
NDE1-203ENST00000570727 RIMBP3CA6NJZ7 1639 aa26.95■■□□□ 1.91
NDE1-203ENST00000570727 RIMBP3BA6NNM3 1639 aa26.95■■□□□ 1.91
NDE1-203ENST00000570727 RIMBP3Q9UFD9 1639 aa26.95■■□□□ 1.91
NDE1-203ENST00000570727 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
NDE1-203ENST00000570727 SOGA1O94964 1423 aa26.9■■□□□ 1.9
NDE1-203ENST00000570727 CHD1O14646 1710 aa26.87■■□□□ 1.89
NDE1-203ENST00000570727 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
NDE1-203ENST00000570727 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
NDE1-203ENST00000570727 CUX1P39880 1505 aa26.84■■□□□ 1.89
NDE1-203ENST00000570727 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
NDE1-203ENST00000570727 FBLN2P98095 1184 aa26.81■■□□□ 1.88
NDE1-203ENST00000570727 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
NDE1-203ENST00000570727 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
NDE1-203ENST00000570727 CYB5RLQ6IPT4 315 aa26.71■■□□□ 1.87
NDE1-203ENST00000570727 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.87
NDE1-203ENST00000570727 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
NDE1-203ENST00000570727 CHMP7Q8WUX9 453 aaPredicted RBP26.63■■□□□ 1.85
NDE1-203ENST00000570727 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
NDE1-203ENST00000570727 ARAP1Q96P48 1450 aa26.61■■□□□ 1.85
NDE1-203ENST00000570727 GAPVD1Q14C86 1478 aa26.56■■□□□ 1.84
NDE1-203ENST00000570727 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
NDE1-203ENST00000570727 SYNJ2O15056 1496 aa26.54■■□□□ 1.84
NDE1-203ENST00000570727 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
NDE1-203ENST00000570727 PBRM1Q86U86 1689 aa26.52■■□□□ 1.84
NDE1-203ENST00000570727 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
NDE1-203ENST00000570727 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
NDE1-203ENST00000570727 WRNQ14191 1432 aaPredicted RBP eCLIP26.43■■□□□ 1.82
NDE1-203ENST00000570727 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
NDE1-203ENST00000570727 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.82
NDE1-203ENST00000570727 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
NDE1-203ENST00000570727 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
NDE1-203ENST00000570727 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
NDE1-203ENST00000570727 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
NDE1-203ENST00000570727 NUP160Q12769 1436 aa26.22■■□□□ 1.79
NDE1-203ENST00000570727 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
NDE1-203ENST00000570727 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
NDE1-203ENST00000570727 ERCC6L2Q5T890 1561 aa26.18■■□□□ 1.78
NDE1-203ENST00000570727 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
NDE1-203ENST00000570727 JPH4Q96JJ6 628 aa26.01■■□□□ 1.75
NDE1-203ENST00000570727 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
NDE1-203ENST00000570727 IGF1RP08069 1367 aa25.94■■□□□ 1.74
NDE1-203ENST00000570727 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms