Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.783e-6■■■□□ 16.1
XRCC6P12956 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.83e-6■■■□□ 16.1
XRCC6P12956 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.54□□□□□ -1.843e-6■■■□□ 16.1
XRCC6P12956 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.853e-6■■■□□ 16.1
XRCC6P12956 CHD9-209ENST00000564255 2896 ntTSL 53.05□□□□□ -1.923e-6■■■□□ 16.1
XRCC6P12956 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.01□□□□□ -1.933e-6■■■□□ 16.1
XRCC6P12956 XIAP-204ENST00000430625 528 ntTSL 32.66□□□□□ -1.983e-6■■■□□ 16.1
XRCC6P12956 TMC6-214ENST00000590162 517 ntTSL 216.69■□□□□ 0.269e-26■■■□□ 16.1
XRCC6P12956 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.034e-6■■■□□ 16.1
XRCC6P12956 ULK1-205ENST00000541761 1262 ntTSL 217.42■□□□□ 0.384e-6■■■□□ 16.1
XRCC6P12956 SEMA4C-206ENST00000482925 3776 ntTSL 217.02■□□□□ 0.314e-7■■■□□ 16
XRCC6P12956 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.125e-6■■■□□ 15.9
XRCC6P12956 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.15e-6■■■□□ 15.9
XRCC6P12956 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.64■□□□□ 0.735e-6■■■□□ 15.9
XRCC6P12956 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.725e-6■■■□□ 15.9
XRCC6P12956 RPS13-205ENST00000527571 777 ntTSL 218.58■□□□□ 0.566e-12■■■□□ 15.9
XRCC6P12956 RPS13-206ENST00000528074 583 ntTSL 218.3■□□□□ 0.526e-12■■■□□ 15.9
XRCC6P12956 RPS13-210ENST00000534329 568 ntTSL 215.45■□□□□ 0.066e-12■■■□□ 15.9
XRCC6P12956 NOP58-207ENST00000478941 508 ntTSL 36.56□□□□□ -1.366e-32■■■□□ 15.9
XRCC6P12956 SNORD70.1-201ENST00000391007 85 ntBASIC3.72□□□□□ -1.816e-32■■■□□ 15.9
XRCC6P12956 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.25e-15■■■□□ 15.9
XRCC6P12956 RPL4-214ENST00000567229 2003 ntTSL 513.07□□□□□ -0.325e-15■■■□□ 15.9
XRCC6P12956 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC12.48□□□□□ -0.415e-15■■■□□ 15.9
XRCC6P12956 RPL4-217ENST00000569696 569 ntTSL 511.68□□□□□ -0.545e-15■■■□□ 15.9
XRCC6P12956 RPL4-210ENST00000566039 1099 ntTSL 29.8□□□□□ -0.845e-15■■■□□ 15.9
XRCC6P12956 RPL4-203ENST00000561775 1396 ntTSL 58.63□□□□□ -1.035e-15■■■□□ 15.9
XRCC6P12956 PFKL-207ENST00000474114 6007 ntTSL 1 (best)21.28■■□□□ 11e-6■■■□□ 15.9
XRCC6P12956 PFKL-211ENST00000498841 3122 ntTSL 1 (best)20.81■□□□□ 0.921e-6■■■□□ 15.9
XRCC6P12956 NOP58-203ENST00000433543 714 ntTSL 35.86□□□□□ -1.472e-9■■■□□ 15.8
XRCC6P12956 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.96■□□□□ 0.631e-9■■■□□ 15.8
XRCC6P12956 DYNC1LI2-204ENST00000561727 502 ntTSL 411.41□□□□□ -0.581e-9■■■□□ 15.8
XRCC6P12956 RPL37-202ENST00000504562 505 ntTSL 212.64□□□□□ -0.394e-13■■■□□ 15.8
XRCC6P12956 RPL37-203ENST00000507642 425 ntTSL 38.8□□□□□ -14e-13■■■□□ 15.8
XRCC6P12956 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.71□□□□□ -1.024e-13■■■□□ 15.8
XRCC6P12956 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.184e-13■■■□□ 15.8
XRCC6P12956 SNORD72-201ENST00000390994 80 ntBASIC1.97□□□□□ -2.094e-13■■■□□ 15.8
XRCC6P12956 SGSM3-203ENST00000427834 793 ntTSL 221.66■■□□□ 1.064e-7■■■□□ 15.8
XRCC6P12956 SGSM3-207ENST00000469719 1029 ntTSL 517.55■□□□□ 0.44e-7■■■□□ 15.8
XRCC6P12956 SGSM3-205ENST00000462457 881 ntTSL 516.77■□□□□ 0.284e-7■■■□□ 15.8
XRCC6P12956 SGSM3-202ENST00000417424 666 ntTSL 516.56■□□□□ 0.244e-7■■■□□ 15.8
XRCC6P12956 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.244e-7■■■□□ 15.8
XRCC6P12956 SGSM3-213ENST00000485962 2973 ntTSL 515.29■□□□□ 0.044e-7■■■□□ 15.8
XRCC6P12956 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.124e-7■■■□□ 15.8
XRCC6P12956 SGSM3-209ENST00000478085 4218 ntTSL 213.65□□□□□ -0.224e-7■■■□□ 15.8
XRCC6P12956 VPS13B-206ENST00000496144 5625 ntTSL 59.96□□□□□ -0.829e-6■■■□□ 15.7
XRCC6P12956 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.129e-6■■■□□ 15.7
XRCC6P12956 KMT2C-212ENST00000558084 16862 ntTSL 1 (best)8.05□□□□□ -1.129e-6■■■□□ 15.7
XRCC6P12956 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.129e-6■■■□□ 15.7
XRCC6P12956 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.29e-6■■■□□ 15.7
XRCC6P12956 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.239e-6■■■□□ 15.7
XRCC6P12956 VPS13B-211ENST00000522802 570 ntTSL 36.77□□□□□ -1.339e-6■■■□□ 15.7
XRCC6P12956 KMT2C-208ENST00000473186 12854 ntTSL 1 (best)4.67□□□□□ -1.669e-6■■■□□ 15.7
XRCC6P12956 OXSR1-202ENST00000426620 1581 ntTSL 1 (best)28.36■■■□□ 2.138e-8■■■□□ 15.7
XRCC6P12956 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.172e-9■■■□□ 15.7
XRCC6P12956 AURKAIP1-205ENST00000489799 695 ntTSL 1 (best)27.13■■□□□ 1.932e-9■■■□□ 15.7
XRCC6P12956 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.72■■□□□ 1.552e-7■■■□□ 15.7
XRCC6P12956 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.542e-9■■■□□ 15.7
XRCC6P12956 SREBF1-216ENST00000490796 698 ntTSL 221.89■■□□□ 1.092e-7■■■□□ 15.7
XRCC6P12956 SREBF1-204ENST00000395756 3026 ntTSL 221.52■■□□□ 1.042e-7■■■□□ 15.7
XRCC6P12956 SREBF1-203ENST00000395751 4653 ntTSL 220.7■□□□□ 0.92e-7■■■□□ 15.7
XRCC6P12956 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.832e-9■■■□□ 15.7
XRCC6P12956 AURKAIP1-206ENST00000496905 608 ntTSL 220.14■□□□□ 0.812e-9■■■□□ 15.7
XRCC6P12956 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)19.4■□□□□ 0.72e-7■■■□□ 15.7
XRCC6P12956 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.632e-7■■■□□ 15.7
XRCC6P12956 TOP3B-206ENST00000436282 2890 ntTSL 218.93■□□□□ 0.622e-7■■■□□ 15.7
XRCC6P12956 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.612e-7■■■□□ 15.7
XRCC6P12956 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.532e-9■■■□□ 15.7
XRCC6P12956 TOP3B-214ENST00000457270 2956 ntTSL 518.15■□□□□ 0.52e-7■■■□□ 15.7
XRCC6P12956 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.412e-7■■■□□ 15.7
XRCC6P12956 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.392e-7■■■□□ 15.7
XRCC6P12956 TOP3B-213ENST00000457179 3061 ntTSL 517.25■□□□□ 0.352e-7■■■□□ 15.7
XRCC6P12956 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC17.1■□□□□ 0.332e-7■■■□□ 15.7
XRCC6P12956 CHAF1A-207ENST00000589648 563 ntTSL 516.34■□□□□ 0.212e-7■■■□□ 15.7
XRCC6P12956 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.182e-7■■■□□ 15.7
XRCC6P12956 SREBF1-207ENST00000447641 644 ntTSL 315.81■□□□□ 0.122e-7■■■□□ 15.7
XRCC6P12956 RABGEF1-211ENST00000503687 4139 ntTSL 215.56■□□□□ 0.082e-7■■■□□ 15.7
XRCC6P12956 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC15.31■□□□□ 0.042e-7■■■□□ 15.7
XRCC6P12956 KCTD7-210ENST00000640601 855 ntTSL 514.83□□□□□ -0.042e-7■■■□□ 15.7
XRCC6P12956 SREBF1-223ENST00000584760 564 ntTSL 214.82□□□□□ -0.042e-7■■■□□ 15.7
XRCC6P12956 KCTD7-211ENST00000640851 3745 ntTSL 5 BASIC12.92□□□□□ -0.342e-7■■■□□ 15.7
XRCC6P12956 TOP3B-210ENST00000444502 4163 ntTSL 212.82□□□□□ -0.362e-7■■■□□ 15.7
XRCC6P12956 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC12.16□□□□□ -0.462e-7■■■□□ 15.7
XRCC6P12956 KCTD7-208ENST00000640234 1704 ntTSL 511.69□□□□□ -0.542e-7■■■□□ 15.7
XRCC6P12956 KCTD7-204ENST00000638524 3747 ntTSL 511.4□□□□□ -0.582e-7■■■□□ 15.7
XRCC6P12956 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC11.36□□□□□ -0.592e-7■■■□□ 15.7
XRCC6P12956 KCTD7-205ENST00000638540 4471 ntTSL 510.95□□□□□ -0.662e-7■■■□□ 15.7
XRCC6P12956 PRR14L-204ENST00000431684 2841 ntTSL 210.89□□□□□ -0.672e-7■■■□□ 15.7
XRCC6P12956 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.252e-7■■■□□ 15.7
XRCC6P12956 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.12e-15■■■□□ 15.7
XRCC6P12956 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.82■■□□□ 1.082e-15■■■□□ 15.7
XRCC6P12956 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.892e-15■■■□□ 15.7
XRCC6P12956 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)20.51■□□□□ 0.872e-15■■■□□ 15.7
XRCC6P12956 MAPK8IP3-207ENST00000564098 4436 ntTSL 218.79■□□□□ 0.62e-15■■■□□ 15.7
XRCC6P12956 MAPK8IP3-213ENST00000568271 752 ntTSL 516.22■□□□□ 0.192e-15■■■□□ 15.7
XRCC6P12956 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.522e-12■■■□□ 15.7
XRCC6P12956 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.522e-12■■■□□ 15.7
XRCC6P12956 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.522e-12■■■□□ 15.7
XRCC6P12956 NEAT1-202ENST00000501122 22743 ntBASIC5.7□□□□□ -1.57e-26■■■□□ 15.7
XRCC6P12956 NUBP2-205ENST00000564227 903 ntTSL 324.38■■□□□ 1.494e-9■■■□□ 15.7
XRCC6P12956 NUBP2-211ENST00000567700 2196 ntTSL 224.32■■□□□ 1.484e-9■■■□□ 15.7
Retrieved 100 of 6,788 protein–RNA pairs in 97.6 ms