RNA–Protein interactions for RNA: ENST00000589648.1

CHAF1A-207, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-207ENST00000589648 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
CHAF1A-207ENST00000589648 ABCC9O60706 1549 aa34.43■■■■□ 3.1
CHAF1A-207ENST00000589648 CCDC180Q9P1Z9 1646 aa33.96■■■■□ 3.03
CHAF1A-207ENST00000589648 DNAJC5BQ9UF47 199 aa32.7■■■□□ 2.83
CHAF1A-207ENST00000589648 RB1CC1Q8TDY2 1594 aa32.55■■■□□ 2.8
CHAF1A-207ENST00000589648 NACADO15069 1562 aa32.24■■■□□ 2.75
CHAF1A-207ENST00000589648 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
CHAF1A-207ENST00000589648 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.72
CHAF1A-207ENST00000589648 UNC13AQ9UPW8 1703 aa31.76■■■□□ 2.67
CHAF1A-207ENST00000589648 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
CHAF1A-207ENST00000589648 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.66
CHAF1A-207ENST00000589648 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
CHAF1A-207ENST00000589648 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
CHAF1A-207ENST00000589648 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
CHAF1A-207ENST00000589648 CECR2Q9BXF3 1484 aa31.05■■■□□ 2.56
CHAF1A-207ENST00000589648 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
CHAF1A-207ENST00000589648 SCRIBQ14160 1630 aa30.97■■■□□ 2.55
CHAF1A-207ENST00000589648 EIF4G1Q04637 1599 aaKnown RBP30.89■■■□□ 2.54
CHAF1A-207ENST00000589648 DNAJC5Q9H3Z4 198 aa30.28■■■□□ 2.44
CHAF1A-207ENST00000589648 CUX2O14529 1486 aa29.8■■■□□ 2.36
CHAF1A-207ENST00000589648 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
CHAF1A-207ENST00000589648 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
CHAF1A-207ENST00000589648 ATAD2BQ9ULI0 1458 aa29.66■■■□□ 2.34
CHAF1A-207ENST00000589648 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
CHAF1A-207ENST00000589648 HMGXB3Q12766 1538 aa29.5■■■□□ 2.31
CHAF1A-207ENST00000589648 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
CHAF1A-207ENST00000589648 NESP48681 1621 aa29.47■■■□□ 2.31
CHAF1A-207ENST00000589648 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
CHAF1A-207ENST00000589648 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
CHAF1A-207ENST00000589648 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
CHAF1A-207ENST00000589648 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
CHAF1A-207ENST00000589648 LAMC3Q9Y6N6 1575 aa29.15■■■□□ 2.26
CHAF1A-207ENST00000589648 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
CHAF1A-207ENST00000589648 PDS5BQ9NTI5 1447 aa29.03■■■□□ 2.24
CHAF1A-207ENST00000589648 KIF21AQ7Z4S6 1674 aa29.01■■■□□ 2.23
CHAF1A-207ENST00000589648 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
CHAF1A-207ENST00000589648 MRC2Q9UBG0 1479 aa28.8■■■□□ 2.2
CHAF1A-207ENST00000589648 TRIM41Q8WV44 630 aa28.79■■■□□ 2.2
CHAF1A-207ENST00000589648 WDR62O43379 1518 aa28.73■■■□□ 2.19
CHAF1A-207ENST00000589648 WIZO95785 1651 aa28.69■■■□□ 2.18
CHAF1A-207ENST00000589648 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
CHAF1A-207ENST00000589648 FANCD2Q9BXW9 1451 aa28.55■■■□□ 2.16
CHAF1A-207ENST00000589648 CFTRP13569 1480 aa28.46■■■□□ 2.15
CHAF1A-207ENST00000589648 OSCARQ8IYS5 282 aa28.41■■■□□ 2.14
CHAF1A-207ENST00000589648 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
CHAF1A-207ENST00000589648 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
CHAF1A-207ENST00000589648 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
CHAF1A-207ENST00000589648 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
CHAF1A-207ENST00000589648 RIMBP3CA6NJZ7 1639 aa28.05■■■□□ 2.08
CHAF1A-207ENST00000589648 RIMBP3BA6NNM3 1639 aa28.05■■■□□ 2.08
CHAF1A-207ENST00000589648 IFT140Q96RY7 1462 aa28.05■■■□□ 2.08
CHAF1A-207ENST00000589648 RIMBP3Q9UFD9 1639 aa28.05■■■□□ 2.08
CHAF1A-207ENST00000589648 PRDM2Q13029 1718 aa28.03■■■□□ 2.08
CHAF1A-207ENST00000589648 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
CHAF1A-207ENST00000589648 TOPBP1Q92547 1522 aa27.96■■■□□ 2.07
CHAF1A-207ENST00000589648 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
CHAF1A-207ENST00000589648 EIF4G3O43432 1585 aaKnown RBP27.85■■■□□ 2.05
CHAF1A-207ENST00000589648 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
CHAF1A-207ENST00000589648 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
CHAF1A-207ENST00000589648 CYB5RLQ6IPT4 315 aa27.79■■■□□ 2.04
CHAF1A-207ENST00000589648 AQRO60306 1485 aaKnown RBP eCLIP27.77■■■□□ 2.042e-6■■□□□ 13.2
CHAF1A-207ENST00000589648 TARBP1Q13395 1621 aaKnown RBP27.72■■■□□ 2.03
CHAF1A-207ENST00000589648 CHD1O14646 1710 aa27.68■■■□□ 2.02
CHAF1A-207ENST00000589648 FBLN2P98095 1184 aa27.67■■■□□ 2.02
CHAF1A-207ENST00000589648 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
CHAF1A-207ENST00000589648 ARAP1Q96P48 1450 aa27.65■■■□□ 2.02
CHAF1A-207ENST00000589648 TRHP20396 242 aaPredicted RBP27.6■■■□□ 2.01
CHAF1A-207ENST00000589648 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
CHAF1A-207ENST00000589648 TDRD9Q8NDG6 1382 aaKnown RBP27.55■■■□□ 2
CHAF1A-207ENST00000589648 SOGA1O94964 1423 aa27.53■■■□□ 2
CHAF1A-207ENST00000589648 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
CHAF1A-207ENST00000589648 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
CHAF1A-207ENST00000589648 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
CHAF1A-207ENST00000589648 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
CHAF1A-207ENST00000589648 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
CHAF1A-207ENST00000589648 MAGI1Q96QZ7 1491 aaPredicted RBP27.35■■□□□ 1.97
CHAF1A-207ENST00000589648 CUX1P39880 1505 aa27.34■■□□□ 1.97
CHAF1A-207ENST00000589648 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
CHAF1A-207ENST00000589648 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
CHAF1A-207ENST00000589648 SYNJ2O15056 1496 aa27.28■■□□□ 1.96
CHAF1A-207ENST00000589648 GAPVD1Q14C86 1478 aa27.17■■□□□ 1.94
CHAF1A-207ENST00000589648 PBRM1Q86U86 1689 aa27.12■■□□□ 1.93
CHAF1A-207ENST00000589648 ABCA10Q8WWZ4 1543 aa27.08■■□□□ 1.93
CHAF1A-207ENST00000589648 AEBP2Q6ZN18 517 aaPredicted RBP27.07■■□□□ 1.92
CHAF1A-207ENST00000589648 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
CHAF1A-207ENST00000589648 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
CHAF1A-207ENST00000589648 GRIN2AQ12879 1464 aa26.97■■□□□ 1.91
CHAF1A-207ENST00000589648 WRNQ14191 1432 aaPredicted RBP eCLIP26.91■■□□□ 1.9
CHAF1A-207ENST00000589648 NUP160Q12769 1436 aa26.9■■□□□ 1.9
CHAF1A-207ENST00000589648 CEP170Q5SW79 1584 aa26.89■■□□□ 1.9
CHAF1A-207ENST00000589648 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
CHAF1A-207ENST00000589648 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
CHAF1A-207ENST00000589648 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
CHAF1A-207ENST00000589648 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
CHAF1A-207ENST00000589648 TOP2BQ02880 1626 aa26.77■■□□□ 1.88
CHAF1A-207ENST00000589648 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
CHAF1A-207ENST00000589648 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
CHAF1A-207ENST00000589648 PRG4Q92954 1404 aaPredicted RBP26.69■■□□□ 1.86
CHAF1A-207ENST00000589648 JPH4Q96JJ6 628 aa26.65■■□□□ 1.86
CHAF1A-207ENST00000589648 KIF13AQ9H1H9 1805 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms