RNA–Protein interactions for RNA: ENST00000528074.1

RPS13-206, Transcript of ribosomal protein S13, humanhuman

TSL 2

Gene RPS13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-206ENST00000528074 NISCHQ9Y2I1 1504 aa39.5■■■■□ 3.91
RPS13-206ENST00000528074 CCDC180Q9P1Z9 1646 aa35.42■■■■□ 3.26
RPS13-206ENST00000528074 ABCC9O60706 1549 aa35.01■■■■□ 3.19
RPS13-206ENST00000528074 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
RPS13-206ENST00000528074 NACADO15069 1562 aa33.32■■■□□ 2.92
RPS13-206ENST00000528074 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
RPS13-206ENST00000528074 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
RPS13-206ENST00000528074 UNC13AQ9UPW8 1703 aa32.89■■■□□ 2.86
RPS13-206ENST00000528074 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
RPS13-206ENST00000528074 DCAF1Q9Y4B6 1507 aa32.65■■■□□ 2.82
RPS13-206ENST00000528074 PABPN1Q86U42 306 aaKnown RBP eCLIP32.56■■■□□ 2.8
RPS13-206ENST00000528074 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
RPS13-206ENST00000528074 DNAJC5BQ9UF47 199 aa32.46■■■□□ 2.79
RPS13-206ENST00000528074 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
RPS13-206ENST00000528074 SHROOM4Q9ULL8 1493 aa32.06■■■□□ 2.72
RPS13-206ENST00000528074 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
RPS13-206ENST00000528074 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
RPS13-206ENST00000528074 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
RPS13-206ENST00000528074 SMARCA4P51532 1647 aa30.82■■■□□ 2.52
RPS13-206ENST00000528074 NCAPD3P42695 1498 aa30.7■■■□□ 2.5
RPS13-206ENST00000528074 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
RPS13-206ENST00000528074 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
RPS13-206ENST00000528074 SMARCA2P51531 1590 aa30.64■■■□□ 2.5
RPS13-206ENST00000528074 HMGXB3Q12766 1538 aa30.58■■■□□ 2.49
RPS13-206ENST00000528074 AEBP2Q6ZN18 517 aaPredicted RBP30.49■■■□□ 2.47
RPS13-206ENST00000528074 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
RPS13-206ENST00000528074 MROH2BQ7Z745 1585 aa30.47■■■□□ 2.47
RPS13-206ENST00000528074 BAZ1BQ9UIG0 1483 aaKnown RBP30.43■■■□□ 2.46
RPS13-206ENST00000528074 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
RPS13-206ENST00000528074 NESP48681 1621 aa30.18■■■□□ 2.42
RPS13-206ENST00000528074 WIZO95785 1651 aa30.18■■■□□ 2.42
RPS13-206ENST00000528074 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
RPS13-206ENST00000528074 CUX2O14529 1486 aa30.02■■■□□ 2.4
RPS13-206ENST00000528074 KIF21AQ7Z4S6 1674 aa29.92■■■□□ 2.38
RPS13-206ENST00000528074 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
RPS13-206ENST00000528074 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
RPS13-206ENST00000528074 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
RPS13-206ENST00000528074 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
RPS13-206ENST00000528074 PDS5BQ9NTI5 1447 aa29.75■■■□□ 2.35
RPS13-206ENST00000528074 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
RPS13-206ENST00000528074 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
RPS13-206ENST00000528074 CFTRP13569 1480 aa29.53■■■□□ 2.32
RPS13-206ENST00000528074 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
RPS13-206ENST00000528074 WDR62O43379 1518 aa29.5■■■□□ 2.31
RPS13-206ENST00000528074 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
RPS13-206ENST00000528074 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
RPS13-206ENST00000528074 PRDM2Q13029 1718 aa29.48■■■□□ 2.31
RPS13-206ENST00000528074 CCDC88BA6NC98 1476 aa29.38■■■□□ 2.29
RPS13-206ENST00000528074 URB2Q14146 1524 aaKnown RBP29.25■■■□□ 2.27
RPS13-206ENST00000528074 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
RPS13-206ENST00000528074 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
RPS13-206ENST00000528074 DNMBPQ6XZF7 1577 aa28.93■■■□□ 2.22
RPS13-206ENST00000528074 IFT140Q96RY7 1462 aa28.87■■■□□ 2.21
RPS13-206ENST00000528074 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
RPS13-206ENST00000528074 ZNF608Q9ULD9 1512 aaPredicted RBP28.82■■■□□ 2.2
RPS13-206ENST00000528074 EIF4G3O43432 1585 aaKnown RBP28.76■■■□□ 2.19
RPS13-206ENST00000528074 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
RPS13-206ENST00000528074 POLA1P09884 1462 aaPredicted RBP28.71■■■□□ 2.19
RPS13-206ENST00000528074 CUX1P39880 1505 aa28.62■■■□□ 2.17
RPS13-206ENST00000528074 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
RPS13-206ENST00000528074 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
RPS13-206ENST00000528074 OSCARQ8IYS5 282 aa28.58■■■□□ 2.17
RPS13-206ENST00000528074 AQRO60306 1485 aaKnown RBP eCLIP28.56■■■□□ 2.167e-12■■■■■ 39.2
RPS13-206ENST00000528074 CHD1O14646 1710 aa28.54■■■□□ 2.16
RPS13-206ENST00000528074 SOGA1O94964 1423 aa28.51■■■□□ 2.15
RPS13-206ENST00000528074 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
RPS13-206ENST00000528074 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
RPS13-206ENST00000528074 TRIM41Q8WV44 630 aa28.41■■■□□ 2.14
RPS13-206ENST00000528074 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
RPS13-206ENST00000528074 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
RPS13-206ENST00000528074 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
RPS13-206ENST00000528074 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
RPS13-206ENST00000528074 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
RPS13-206ENST00000528074 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
RPS13-206ENST00000528074 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
RPS13-206ENST00000528074 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
RPS13-206ENST00000528074 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
RPS13-206ENST00000528074 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
RPS13-206ENST00000528074 GRIN2BQ13224 1484 aa28.26■■■□□ 2.11
RPS13-206ENST00000528074 ABCA10Q8WWZ4 1543 aa28.25■■■□□ 2.11
RPS13-206ENST00000528074 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
RPS13-206ENST00000528074 FBLN2P98095 1184 aa28.23■■■□□ 2.11
RPS13-206ENST00000528074 WRNQ14191 1432 aaPredicted RBP eCLIP28.21■■■□□ 2.11
RPS13-206ENST00000528074 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
RPS13-206ENST00000528074 SYNJ2O15056 1496 aa28.14■■■□□ 2.09
RPS13-206ENST00000528074 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
RPS13-206ENST00000528074 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
RPS13-206ENST00000528074 ADAMTS12P58397 1594 aa28.03■■■□□ 2.08
RPS13-206ENST00000528074 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
RPS13-206ENST00000528074 GRIN2AQ12879 1464 aa27.93■■■□□ 2.06
RPS13-206ENST00000528074 ERICH3Q5RHP9 1530 aa27.92■■■□□ 2.06
RPS13-206ENST00000528074 CYB5RLQ6IPT4 315 aa27.91■■■□□ 2.06
RPS13-206ENST00000528074 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
RPS13-206ENST00000528074 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
RPS13-206ENST00000528074 NUP160Q12769 1436 aa27.81■■■□□ 2.04
RPS13-206ENST00000528074 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
RPS13-206ENST00000528074 SHROOM2Q13796 1616 aa27.72■■■□□ 2.03
RPS13-206ENST00000528074 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
RPS13-206ENST00000528074 CUL7Q14999 1698 aa27.64■■■□□ 2.02
RPS13-206ENST00000528074 KIF27Q86VH2 1401 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms