RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
SGSM3-213ENST00000485962 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
SGSM3-213ENST00000485962 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
SGSM3-213ENST00000485962 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
SGSM3-213ENST00000485962 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
SGSM3-213ENST00000485962 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
SGSM3-213ENST00000485962 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
SGSM3-213ENST00000485962 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
SGSM3-213ENST00000485962 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
SGSM3-213ENST00000485962 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
SGSM3-213ENST00000485962 MYT1Q01538 1121 aa20.4■□□□□ 0.86
SGSM3-213ENST00000485962 HRCP23327 699 aa20.16■□□□□ 0.82
SGSM3-213ENST00000485962 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
SGSM3-213ENST00000485962 ABCC9O60706 1549 aa20.12■□□□□ 0.81
SGSM3-213ENST00000485962 PRKCSHP14314 528 aaPredicted RBP20.1■□□□□ 0.81
SGSM3-213ENST00000485962 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
SGSM3-213ENST00000485962 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
SGSM3-213ENST00000485962 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
SGSM3-213ENST00000485962 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
SGSM3-213ENST00000485962 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
SGSM3-213ENST00000485962 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
SGSM3-213ENST00000485962 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
SGSM3-213ENST00000485962 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
SGSM3-213ENST00000485962 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
SGSM3-213ENST00000485962 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.73
SGSM3-213ENST00000485962 NACADO15069 1562 aa19.61■□□□□ 0.73
SGSM3-213ENST00000485962 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
SGSM3-213ENST00000485962 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
SGSM3-213ENST00000485962 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
SGSM3-213ENST00000485962 WIZO95785 1651 aa19.43■□□□□ 0.7
SGSM3-213ENST00000485962 APLP2Q06481 763 aa19.33■□□□□ 0.69
SGSM3-213ENST00000485962 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
SGSM3-213ENST00000485962 BAZ1AQ9NRL2 1556 aaPredicted RBP19.28■□□□□ 0.68
SGSM3-213ENST00000485962 PABPN1Q86U42 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
SGSM3-213ENST00000485962 ERICH6Q7L0X2 663 aa19.23■□□□□ 0.67
SGSM3-213ENST00000485962 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
SGSM3-213ENST00000485962 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
SGSM3-213ENST00000485962 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.65
SGSM3-213ENST00000485962 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
SGSM3-213ENST00000485962 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
SGSM3-213ENST00000485962 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
SGSM3-213ENST00000485962 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.64
SGSM3-213ENST00000485962 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
SGSM3-213ENST00000485962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
SGSM3-213ENST00000485962 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
SGSM3-213ENST00000485962 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
SGSM3-213ENST00000485962 SOGA1O94964 1423 aa18.88■□□□□ 0.61
SGSM3-213ENST00000485962 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
SGSM3-213ENST00000485962 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
SGSM3-213ENST00000485962 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
SGSM3-213ENST00000485962 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
SGSM3-213ENST00000485962 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
SGSM3-213ENST00000485962 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
SGSM3-213ENST00000485962 EEA1Q15075 1411 aa18.77■□□□□ 0.59
SGSM3-213ENST00000485962 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
SGSM3-213ENST00000485962 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
SGSM3-213ENST00000485962 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
SGSM3-213ENST00000485962 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
SGSM3-213ENST00000485962 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
SGSM3-213ENST00000485962 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
SGSM3-213ENST00000485962 CEP164Q9UPV0 1460 aa18.56■□□□□ 0.56
SGSM3-213ENST00000485962 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
SGSM3-213ENST00000485962 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
SGSM3-213ENST00000485962 KIF21BO75037 1637 aa18.5■□□□□ 0.55
SGSM3-213ENST00000485962 CLIP1P30622 1438 aa18.49■□□□□ 0.55
SGSM3-213ENST00000485962 RANGAP1P46060 587 aaPredicted RBP18.48■□□□□ 0.55
SGSM3-213ENST00000485962 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
SGSM3-213ENST00000485962 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
SGSM3-213ENST00000485962 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
SGSM3-213ENST00000485962 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
SGSM3-213ENST00000485962 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
SGSM3-213ENST00000485962 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.54
SGSM3-213ENST00000485962 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
SGSM3-213ENST00000485962 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
SGSM3-213ENST00000485962 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
SGSM3-213ENST00000485962 TOP2BQ02880 1626 aa18.33■□□□□ 0.53
SGSM3-213ENST00000485962 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.52
SGSM3-213ENST00000485962 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
SGSM3-213ENST00000485962 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.5
SGSM3-213ENST00000485962 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
SGSM3-213ENST00000485962 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
SGSM3-213ENST00000485962 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
SGSM3-213ENST00000485962 CUX1P39880 1505 aa18.14■□□□□ 0.49
SGSM3-213ENST00000485962 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
SGSM3-213ENST00000485962 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
SGSM3-213ENST00000485962 MIER1Q8N108 512 aa18.13■□□□□ 0.49
SGSM3-213ENST00000485962 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
SGSM3-213ENST00000485962 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
SGSM3-213ENST00000485962 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
SGSM3-213ENST00000485962 CFTRP13569 1480 aa18.04■□□□□ 0.48
SGSM3-213ENST00000485962 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.48
SGSM3-213ENST00000485962 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
SGSM3-213ENST00000485962 ITGAEP38570 1179 aa17.97■□□□□ 0.47
SGSM3-213ENST00000485962 ARHGAP35Q9NRY4 1499 aa17.97■□□□□ 0.47
SGSM3-213ENST00000485962 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
SGSM3-213ENST00000485962 CUX2O14529 1486 aa17.94■□□□□ 0.46
SGSM3-213ENST00000485962 CCNB3Q8WWL7 1395 aa17.93■□□□□ 0.46
SGSM3-213ENST00000485962 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
SGSM3-213ENST00000485962 ANO8Q9HCE9 1232 aaPredicted RBP17.92■□□□□ 0.46
SGSM3-213ENST00000485962 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms