RNA–Protein interactions for RNA: ENST00000248929.13

SGSM3-201, Transcript of small G protein signaling modulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGSM3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-201ENST00000248929 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
SGSM3-201ENST00000248929 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
SGSM3-201ENST00000248929 CCDC180Q9P1Z9 1646 aa23.73■■□□□ 1.39
SGSM3-201ENST00000248929 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
SGSM3-201ENST00000248929 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
SGSM3-201ENST00000248929 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
SGSM3-201ENST00000248929 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
SGSM3-201ENST00000248929 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
SGSM3-201ENST00000248929 ABCC9O60706 1549 aa22.68■■□□□ 1.22
SGSM3-201ENST00000248929 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
SGSM3-201ENST00000248929 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
SGSM3-201ENST00000248929 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
SGSM3-201ENST00000248929 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
SGSM3-201ENST00000248929 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
SGSM3-201ENST00000248929 NACADO15069 1562 aa22.05■■□□□ 1.12
SGSM3-201ENST00000248929 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
SGSM3-201ENST00000248929 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
SGSM3-201ENST00000248929 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
SGSM3-201ENST00000248929 FAM9AQ8IZU1 332 aaPredicted RBP21.91■■□□□ 1.1
SGSM3-201ENST00000248929 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
SGSM3-201ENST00000248929 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
SGSM3-201ENST00000248929 HRCP23327 699 aa21.84■■□□□ 1.09
SGSM3-201ENST00000248929 WIZO95785 1651 aa21.74■■□□□ 1.07
SGSM3-201ENST00000248929 PABPN1Q86U42 306 aaKnown RBP eCLIP21.71■■□□□ 1.07
SGSM3-201ENST00000248929 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
SGSM3-201ENST00000248929 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
SGSM3-201ENST00000248929 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
SGSM3-201ENST00000248929 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
SGSM3-201ENST00000248929 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
SGSM3-201ENST00000248929 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
SGSM3-201ENST00000248929 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
SGSM3-201ENST00000248929 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
SGSM3-201ENST00000248929 ABCC8Q09428 1581 aa21.29■■□□□ 1
SGSM3-201ENST00000248929 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
SGSM3-201ENST00000248929 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
SGSM3-201ENST00000248929 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
SGSM3-201ENST00000248929 MYT1Q01538 1121 aa21.09■□□□□ 0.97
SGSM3-201ENST00000248929 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
SGSM3-201ENST00000248929 SOGA1O94964 1423 aa21.08■□□□□ 0.97
SGSM3-201ENST00000248929 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
SGSM3-201ENST00000248929 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
SGSM3-201ENST00000248929 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
SGSM3-201ENST00000248929 ZEB1P37275 1124 aaPredicted RBP20.91■□□□□ 0.94
SGSM3-201ENST00000248929 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
SGSM3-201ENST00000248929 WRNQ14191 1432 aaPredicted RBP eCLIP20.89■□□□□ 0.93
SGSM3-201ENST00000248929 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
SGSM3-201ENST00000248929 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
SGSM3-201ENST00000248929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
SGSM3-201ENST00000248929 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
SGSM3-201ENST00000248929 TNIKQ9UKE5 1360 aa20.79■□□□□ 0.92
SGSM3-201ENST00000248929 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
SGSM3-201ENST00000248929 EEA1Q15075 1411 aa20.76■□□□□ 0.91
SGSM3-201ENST00000248929 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
SGSM3-201ENST00000248929 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
SGSM3-201ENST00000248929 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
SGSM3-201ENST00000248929 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
SGSM3-201ENST00000248929 RAPGEF2Q9Y4G8 1499 aa20.54■□□□□ 0.88
SGSM3-201ENST00000248929 CLIP1P30622 1438 aa20.53■□□□□ 0.88
SGSM3-201ENST00000248929 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
SGSM3-201ENST00000248929 KIF21BO75037 1637 aa20.47■□□□□ 0.87
SGSM3-201ENST00000248929 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
SGSM3-201ENST00000248929 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
SGSM3-201ENST00000248929 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
SGSM3-201ENST00000248929 APLP2Q06481 763 aa20.41■□□□□ 0.86
SGSM3-201ENST00000248929 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
SGSM3-201ENST00000248929 VPS8Q8N3P4 1428 aa20.37■□□□□ 0.85
SGSM3-201ENST00000248929 CUX1P39880 1505 aa20.35■□□□□ 0.85
SGSM3-201ENST00000248929 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
SGSM3-201ENST00000248929 CFTRP13569 1480 aa20.29■□□□□ 0.84
SGSM3-201ENST00000248929 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
SGSM3-201ENST00000248929 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
SGSM3-201ENST00000248929 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
SGSM3-201ENST00000248929 KANK4Q5T7N3 995 aaPredicted RBP20.19■□□□□ 0.82
SGSM3-201ENST00000248929 ARAP1Q96P48 1450 aa20.16■□□□□ 0.82
SGSM3-201ENST00000248929 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
SGSM3-201ENST00000248929 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.81
SGSM3-201ENST00000248929 CUX2O14529 1486 aa20.13■□□□□ 0.81
SGSM3-201ENST00000248929 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
SGSM3-201ENST00000248929 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
SGSM3-201ENST00000248929 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
SGSM3-201ENST00000248929 IGF1RP08069 1367 aa20.05■□□□□ 0.8
SGSM3-201ENST00000248929 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
SGSM3-201ENST00000248929 ITGAEP38570 1179 aa20.04■□□□□ 0.8
SGSM3-201ENST00000248929 ARHGAP35Q9NRY4 1499 aa20.02■□□□□ 0.8
SGSM3-201ENST00000248929 P3H3Q8IVL6 736 aa20■□□□□ 0.79
SGSM3-201ENST00000248929 CARMIL1Q5VZK9 1371 aa19.99■□□□□ 0.79
SGSM3-201ENST00000248929 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
SGSM3-201ENST00000248929 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
SGSM3-201ENST00000248929 ATP1B4Q9UN42 357 aaPredicted RBP19.95■□□□□ 0.78
SGSM3-201ENST00000248929 NESP48681 1621 aa19.94■□□□□ 0.78
SGSM3-201ENST00000248929 PRKCSHP14314 528 aaPredicted RBP19.94■□□□□ 0.78
SGSM3-201ENST00000248929 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
SGSM3-201ENST00000248929 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
SGSM3-201ENST00000248929 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
SGSM3-201ENST00000248929 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
SGSM3-201ENST00000248929 DHX57Q6P158 1386 aaKnown RBP19.87■□□□□ 0.77
SGSM3-201ENST00000248929 CCNB3Q8WWL7 1395 aa19.85■□□□□ 0.77
SGSM3-201ENST00000248929 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.77
SGSM3-201ENST00000248929 MIER1Q8N108 512 aa19.83■□□□□ 0.77
SGSM3-201ENST00000248929 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms