RNA–Protein interactions for RNA: ENST00000527571.1

RPS13-205, Transcript of ribosomal protein S13, humanhuman

TSL 2

Gene RPS13, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-205ENST00000527571 NISCHQ9Y2I1 1504 aa43.09■■■■■ 4.49
RPS13-205ENST00000527571 ABCC9O60706 1549 aa39.06■■■■□ 3.84
RPS13-205ENST00000527571 CCDC180Q9P1Z9 1646 aa38.81■■■■□ 3.8
RPS13-205ENST00000527571 DNAJC5BQ9UF47 199 aa37.12■■■■□ 3.53
RPS13-205ENST00000527571 RB1CC1Q8TDY2 1594 aa37.06■■■■□ 3.52
RPS13-205ENST00000527571 NACADO15069 1562 aa36.77■■■■□ 3.48
RPS13-205ENST00000527571 UNC13AQ9UPW8 1703 aa36.28■■■■□ 3.4
RPS13-205ENST00000527571 PABPN1Q86U42 306 aaKnown RBP eCLIP36.28■■■■□ 3.4
RPS13-205ENST00000527571 MYO15BQ96JP2 1530 aa36.28■■■■□ 3.4
RPS13-205ENST00000527571 DCAF8L2P0C7V8 631 aa36.2■■■■□ 3.39
RPS13-205ENST00000527571 BICRAQ9NZM4 1560 aa36.15■■■■□ 3.38
RPS13-205ENST00000527571 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
RPS13-205ENST00000527571 DCAF1Q9Y4B6 1507 aa35.65■■■■□ 3.3
RPS13-205ENST00000527571 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
RPS13-205ENST00000527571 CC2D2AQ9P2K1 1620 aa35.33■■■■□ 3.25
RPS13-205ENST00000527571 CECR2Q9BXF3 1484 aa35.26■■■■□ 3.23
RPS13-205ENST00000527571 SCRIBQ14160 1630 aa35.23■■■■□ 3.23
RPS13-205ENST00000527571 EIF4G1Q04637 1599 aaKnown RBP35.19■■■■□ 3.22
RPS13-205ENST00000527571 DNAJC5Q9H3Z4 198 aa34.29■■■■□ 3.08
RPS13-205ENST00000527571 NCAPD3P42695 1498 aa34.01■■■■□ 3.04
RPS13-205ENST00000527571 CUX2O14529 1486 aa33.88■■■■□ 3.01
RPS13-205ENST00000527571 ATAD2BQ9ULI0 1458 aa33.82■■■■□ 3.01
RPS13-205ENST00000527571 HMGXB3Q12766 1538 aa33.7■■■□□ 2.99
RPS13-205ENST00000527571 ERCC6Q03468 1493 aa33.67■■■□□ 2.98
RPS13-205ENST00000527571 SMARCA4P51532 1647 aa33.67■■■□□ 2.98
RPS13-205ENST00000527571 SMARCA2P51531 1590 aa33.65■■■□□ 2.98
RPS13-205ENST00000527571 NESP48681 1621 aa33.51■■■□□ 2.96
RPS13-205ENST00000527571 PEG3Q9GZU2 1588 aa33.45■■■□□ 2.95
RPS13-205ENST00000527571 BAZ1AQ9NRL2 1556 aaPredicted RBP33.43■■■□□ 2.94
RPS13-205ENST00000527571 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
RPS13-205ENST00000527571 THOC2Q8NI27 1593 aaKnown RBP33.3■■■□□ 2.92
RPS13-205ENST00000527571 LAMC3Q9Y6N6 1575 aa33.22■■■□□ 2.91
RPS13-205ENST00000527571 MROH2BQ7Z745 1585 aa33.19■■■□□ 2.9
RPS13-205ENST00000527571 KIF21AQ7Z4S6 1674 aa33.04■■■□□ 2.88
RPS13-205ENST00000527571 PDS5BQ9NTI5 1447 aa33■■■□□ 2.87
RPS13-205ENST00000527571 CADPSQ9ULU8 1353 aa32.89■■■□□ 2.86
RPS13-205ENST00000527571 MRC2Q9UBG0 1479 aa32.76■■■□□ 2.84
RPS13-205ENST00000527571 WDR62O43379 1518 aa32.75■■■□□ 2.83
RPS13-205ENST00000527571 WIZO95785 1651 aa32.72■■■□□ 2.83
RPS13-205ENST00000527571 CEP164Q9UPV0 1460 aa32.52■■■□□ 2.8
RPS13-205ENST00000527571 CFTRP13569 1480 aa32.49■■■□□ 2.79
RPS13-205ENST00000527571 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
RPS13-205ENST00000527571 TRIM41Q8WV44 630 aa32.41■■■□□ 2.78
RPS13-205ENST00000527571 RSF1Q96T23 1441 aaPredicted RBP32.39■■■□□ 2.78
RPS13-205ENST00000527571 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
RPS13-205ENST00000527571 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
RPS13-205ENST00000527571 OSCARQ8IYS5 282 aa32.19■■■□□ 2.74
RPS13-205ENST00000527571 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
RPS13-205ENST00000527571 CCDC88BA6NC98 1476 aa31.96■■■□□ 2.71
RPS13-205ENST00000527571 ZNF608Q9ULD9 1512 aaPredicted RBP31.95■■■□□ 2.7
RPS13-205ENST00000527571 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
RPS13-205ENST00000527571 RIMBP3CA6NJZ7 1639 aa31.87■■■□□ 2.69
RPS13-205ENST00000527571 RIMBP3BA6NNM3 1639 aa31.87■■■□□ 2.69
RPS13-205ENST00000527571 RIMBP3Q9UFD9 1639 aa31.87■■■□□ 2.69
RPS13-205ENST00000527571 TOPBP1Q92547 1522 aa31.86■■■□□ 2.69
RPS13-205ENST00000527571 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
RPS13-205ENST00000527571 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
RPS13-205ENST00000527571 EIF4G3O43432 1585 aaKnown RBP31.72■■■□□ 2.67
RPS13-205ENST00000527571 DNMBPQ6XZF7 1577 aa31.7■■■□□ 2.67
RPS13-205ENST00000527571 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
RPS13-205ENST00000527571 AQRO60306 1485 aaKnown RBP eCLIP31.57■■■□□ 2.647e-12■■■■■ 39.2
RPS13-205ENST00000527571 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
RPS13-205ENST00000527571 CHD1O14646 1710 aa31.51■■■□□ 2.63
RPS13-205ENST00000527571 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
RPS13-205ENST00000527571 CYB5RLQ6IPT4 315 aa31.42■■■□□ 2.62
RPS13-205ENST00000527571 RAD54L2Q9Y4B4 1467 aa31.38■■■□□ 2.61
RPS13-205ENST00000527571 SOGA1O94964 1423 aa31.31■■■□□ 2.6
RPS13-205ENST00000527571 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
RPS13-205ENST00000527571 WDR97A6NE52 1622 aa31.28■■■□□ 2.6
RPS13-205ENST00000527571 CLASP1Q7Z460 1538 aa31.26■■■□□ 2.59
RPS13-205ENST00000527571 FBLN2P98095 1184 aa31.24■■■□□ 2.59
RPS13-205ENST00000527571 FGD5Q6ZNL6 1462 aa31.23■■■□□ 2.59
RPS13-205ENST00000527571 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
RPS13-205ENST00000527571 CUX1P39880 1505 aa31.2■■■□□ 2.59
RPS13-205ENST00000527571 MAGI1Q96QZ7 1491 aaPredicted RBP31.16■■■□□ 2.58
RPS13-205ENST00000527571 GRIN2BQ13224 1484 aa31.1■■■□□ 2.57
RPS13-205ENST00000527571 TRHP20396 242 aaPredicted RBP31.07■■■□□ 2.56
RPS13-205ENST00000527571 SYNJ1O43426 1573 aa31.07■■■□□ 2.56
RPS13-205ENST00000527571 SYNJ2O15056 1496 aa31.06■■■□□ 2.56
RPS13-205ENST00000527571 CHMP7Q8WUX9 453 aaPredicted RBP31.03■■■□□ 2.56
RPS13-205ENST00000527571 GAPVD1Q14C86 1478 aa30.94■■■□□ 2.54
RPS13-205ENST00000527571 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
RPS13-205ENST00000527571 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
RPS13-205ENST00000527571 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
RPS13-205ENST00000527571 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
RPS13-205ENST00000527571 ERCC6L2Q5T890 1561 aa30.71■■■□□ 2.51
RPS13-205ENST00000527571 NUP160Q12769 1436 aa30.7■■■□□ 2.5
RPS13-205ENST00000527571 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
RPS13-205ENST00000527571 CEP170Q5SW79 1584 aa30.65■■■□□ 2.5
RPS13-205ENST00000527571 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
RPS13-205ENST00000527571 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
RPS13-205ENST00000527571 BIVM-ERCC5R4GMW8 1640 aa30.6■■■□□ 2.49
RPS13-205ENST00000527571 TOP2BQ02880 1626 aa30.59■■■□□ 2.49
RPS13-205ENST00000527571 FHAD1B1AJZ9 1412 aa30.55■■■□□ 2.48
RPS13-205ENST00000527571 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
RPS13-205ENST00000527571 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
RPS13-205ENST00000527571 AEBP2Q6ZN18 517 aaPredicted RBP30.38■■■□□ 2.45
RPS13-205ENST00000527571 KIF13AQ9H1H9 1805 aa30.34■■■□□ 2.45
RPS13-205ENST00000527571 PRG4Q92954 1404 aaPredicted RBP30.32■■■□□ 2.44
RPS13-205ENST00000527571 JPH4Q96JJ6 628 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms