Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.94□□□□□ -0.02
RTN4RL1Q86UN2 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 AL157996.1-201ENST00000624684 2299 ntBASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 SIRPB3P-201ENST00000340424 1216 ntBASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 HLA-DMA-202ENST00000395303 1007 ntBASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 AC104212.2-201ENST00000478813 628 ntBASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 GGNBP1-204ENST00000613113 887 ntBASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4RL1Q86UN2 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 AC139749.1-202ENST00000617529 3139 ntBASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 AC090643.2-201ENST00000623442 2029 ntBASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 AL928654.5-201ENST00000624831 2501 ntBASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 RN7SL121P-201ENST00000584223 273 ntBASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4RL1Q86UN2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 AC040160.2-201ENST00000623816 1675 ntBASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4RL1Q86UN2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms